BLASTX nr result

ID: Atractylodes21_contig00013764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013764
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    95   5e-18
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    95   5e-18
ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ...    77   1e-12
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    74   1e-11

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
 Frame = +1

Query: 1   RKFAVDTMYDIQFESQLNNWIRYAISCNVEELNLRF--------DSLEAVFMLKEDFFVN 156
           +KF +D  Y  QF+S +N WIR+A   NVEEL+L+F          ++    L +  + N
Sbjct: 144 KKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYAN 203

Query: 157 SCFTDLKLSGCIFNPTRAISWKRLKSLWISYGNLDEYLIKNILSGCPLLETLALNDYHGY 336
           S    L L  C   PT  ISW  LK+L I    L + LI+ ILSGCP LE+L L+   G 
Sbjct: 204 SSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGI 263

Query: 337 WRLGITSKSIKKLVFS 384
             L ITS S+KKLV +
Sbjct: 264 NSLNITSASLKKLVIN 279


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
 Frame = +1

Query: 1   RKFAVDTMYDIQFESQLNNWIRYAISCNVEELNLRF--------DSLEAVFMLKEDFFVN 156
           +KF +D  Y  QF+S +N WIR+A   NVEEL+L+F          ++    L +  + N
Sbjct: 52  KKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYAN 111

Query: 157 SCFTDLKLSGCIFNPTRAISWKRLKSLWISYGNLDEYLIKNILSGCPLLETLALNDYHGY 336
           S    L L  C   PT  ISW  LK+L I    L + LI+ ILSGCP LE+L L+   G 
Sbjct: 112 SSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGI 171

Query: 337 WRLGITSKSIKKLVFS 384
             L ITS S+KKLV +
Sbjct: 172 NSLNITSASLKKLVIN 187


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
 Frame = +1

Query: 1   RKFAVDTMYDIQFESQLNNWIRYAISCNVEELNLRF--------DSLEAVFMLKEDFFVN 156
           +KF +D  Y  QF+S +N WIR+A   NVEEL+L+F          ++    L +  + N
Sbjct: 144 KKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYAN 203

Query: 157 SCFTDLKLSGCIFNPTRAISWKRLKSLWISYGNLDEYLIKNILSGCPLLETLALNDYHGY 336
           S    L L  C   PT  ISW  LK+L I    L + LI+ ILSGCP LE+L L+   G 
Sbjct: 204 SSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGI 263

Query: 337 WRLGITSKSIKKLVFS 384
             L ITS S+KKLV +
Sbjct: 264 NSLNITSASLKKLVIN 279


>ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 348

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/121 (34%), Positives = 68/121 (56%)
 Frame = +1

Query: 25  YDIQFESQLNNWIRYAISCNVEELNLRFDSLEAVFMLKEDFFVNSCFTDLKLSGCIFNPT 204
           Y  +++SQ++  +R+AI    + L L F      + L + F+ N   T++ LS C F+  
Sbjct: 110 YMSEYQSQISLCMRFAIKKEAKVLTLDFHPSNQGYRLPQFFYSNDSVTEMTLSSCGFSLN 169

Query: 205 RAISWKRLKSLWISYGNLDEYLIKNILSGCPLLETLALNDYHGYWRLGITSKSIKKLVFS 384
             ++W+ LK L I +  L   +IK+ILSG P LE+  L++  G  +L I SK +K+LV  
Sbjct: 170 ADVNWRSLKVLCIQFAYLTNRVIKDILSGSPQLESFELHNCQGIGQLDIASKCLKRLVLD 229

Query: 385 G 387
           G
Sbjct: 230 G 230


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
 Frame = +1

Query: 1   RKFAVDTMYDIQFESQLNNWIRYAISCNVEELNLRFDSLEA----VFMLKEDFFVNSCFT 168
           +KF V+  +   F++Q+++W+ +A+   VEEL L F    A     + L    + N    
Sbjct: 119 KKFLVEFEFTECFKAQVDSWVDFAVRLKVEELCLEFHREIADDPDYYYLPNFLYSNIPAE 178

Query: 169 DLKLSGCIFNPTRA--ISWKRLKSLWISYGNLDEYLIKNILSGCPLLETLALNDYHGYWR 342
            L L  C  +P +   +SW  LK L ISY  L   +IKNI  GC LLE L LN   G+ +
Sbjct: 179 KLSLRFCALSPNKLKQVSWMSLKVLSISYSWLSNEMIKNIFLGCSLLEYLKLNQCCGFDQ 238

Query: 343 LGIT-SKSIKKLVFSGDSNPNGEF 411
           +    S S+K LV  G   P  +F
Sbjct: 239 INTNFSSSLKDLVVDGSWGPEDKF 262


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