BLASTX nr result

ID: Atractylodes21_contig00013711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013711
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    61   8e-08
ref|XP_003598336.1| F-box/kelch-repeat protein [Medicago truncat...    56   3e-06
ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
 Frame = +2

Query: 5   VSKAWKALIDSPEFIAA---YSVRHTHPHHLLIRYEHTVEIDERYVCFVDDDTFPLQRSA 175
           + K W +LI +  FI+    Y++   + ++L++R+       ER+    DDD    +   
Sbjct: 28  ICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSNKKERFALHFDDDDMFSEYQE 87

Query: 176 PALPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVDIDVPDV 355
              PL      D   IVGS +G++CL  ++ H +  +     VLWNPSI  SV + +  +
Sbjct: 88  LDFPLESSW--DYFEIVGSCNGIICLTDNHSHILKRI-----VLWNPSIGLSVTLPLQRI 140

Query: 356 KYGSYTTVLGFGVCPVTSDPKIVKI 430
            Y     VLGFG    T+D K+++I
Sbjct: 141 SYKVSNVVLGFGFDSRTNDYKVIRI 165


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
 Frame = +2

Query: 5   VSKAWKALIDSPEFIAAYSVRHTHPHH------LLIR--YEHTVEIDERYVCFVDDDTFP 160
           VSK W++LI  P F+ ++  +    HH      LL+R  Y    +  ERY    D DT  
Sbjct: 28  VSKPWRSLITDPAFLLSHLNQSNTNHHRNRNRLLLLRRCYSTATKKAERYSLHFDSDTLG 87

Query: 161 LQRSAPALPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVDI 340
           + +    L L     +   ++VGSS+GLLCL G  +             WNPSI++ + +
Sbjct: 88  IYKE---LKLPHVNWNQSFKLVGSSNGLLCLLGQNI-----------FFWNPSIQRFLAL 133

Query: 341 DVPD---VKYGS-YTTVLGFGVCPVTSDPKIVKI 430
             P      YGS Y   LGFG     +D K+V++
Sbjct: 134 PWPSDIFTVYGSPYKYALGFGFDSRANDFKLVRL 167


>ref|XP_003598336.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487384|gb|AES68587.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 255

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
 Frame = +2

Query: 11  KAWKALIDSPEFIAAYSVRHTHPHHLLIRYEHTVEIDERYVCFVDDDTFPLQRSAPALPL 190
           K +  LI   +F   +    T+ HHL++  +     DE +V      ++PL     ++ +
Sbjct: 22  KFFNTLISDSKFTKKHLHMSTYRHHLILSSK-----DESHVM-----SYPLHCIFNSVTI 71

Query: 191 SIQLL-----SDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVDIDVPD- 352
           +   L          +VGS DG+LCL   Y HPV        +LWNPSIRK   +   + 
Sbjct: 72  NANKLHFPFNKHYFSVVGSCDGILCLVS-YRHPV--------ILWNPSIRKFAKLPYLEN 122

Query: 353 -VKYGSYTTVLGFGVCPVTSDPKIVKI 430
            +K G YTT  GFG  P+T + K+V +
Sbjct: 123 PIKGGCYTT-YGFGYVPLTGNYKVVTV 148


>ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|222864273|gb|EEF01404.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/143 (29%), Positives = 74/143 (51%)
 Frame = +2

Query: 2   SVSKAWKALIDSPEFIAAYSVRHTHPHHLLIRYEHTVEIDERYVCFVDDDTFPLQRSAPA 181
           SVSK W +LI S EFI   S+       LL+ + H    ++ Y   +D+++  +  ++  
Sbjct: 29  SVSKYWNSLITSAEFI---SIHLAQAKPLLLFHHH----NQSYSLRLDNESLDMWSNSE- 80

Query: 182 LPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVDIDVPDVKY 361
             L  +   D  +I+GS +G++CL      P +H      +LWNPSI KS+++ +P +  
Sbjct: 81  FELPSKREDDDFQIIGSCNGVICLLNS---PQDH--GHSIILWNPSIGKSLNLVLPRLS- 134

Query: 362 GSYTTVLGFGVCPVTSDPKIVKI 430
             +  + GFG    ++D K V++
Sbjct: 135 DPFHGIFGFGFNRQSNDYKFVRV 157


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