BLASTX nr result

ID: Atractylodes21_contig00013679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013679
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]                   169   3e-40
emb|CAG26902.1| ALY protein [Nicotiana benthamiana]                   166   1e-39
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   160   1e-37
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]   160   1e-37
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...   153   1e-35

>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
          Length = 246

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/114 (73%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   SKRAAPYSAQKVEAPDTTWGHDMFEGHAGAHPA-RSNRVSSGIETGTKLLITNLDYGVSN 178
           +KR+APYS+  V AP++TW HDMF  HA A+PA R     SGIETG KLLI+NLDYGVSN
Sbjct: 47  AKRSAPYSSGPVHAPESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSN 106

Query: 179 EDIKELFAEVGDIKRASVHYDRSGRSKGTAEVVFSRRRDAELAIKRYDNVQLDG 340
           EDIKELF+E GDIKR S+HYD+SGRSKGTAEV+FSRRRDAE AIK+Y+NVQLDG
Sbjct: 107 EDIKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDG 160


>emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
          Length = 249

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/114 (72%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   SKRAAPYSAQKVEAPDTTWGHDMFEGHAGAHPA-RSNRVSSGIETGTKLLITNLDYGVSN 178
           + R+APYS+  V APD+TW H+MF  HA A+PA R     SGIETG KLLI+NLDYGVSN
Sbjct: 50  ANRSAPYSSGPVHAPDSTWDHNMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSN 109

Query: 179 EDIKELFAEVGDIKRASVHYDRSGRSKGTAEVVFSRRRDAELAIKRYDNVQLDG 340
           EDIKELF+E GDIKR S+HYD+SGRSKGTAEV+FSRRRDAE AIK+Y+NVQLDG
Sbjct: 110 EDIKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDG 163


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/113 (71%), Positives = 93/113 (82%)
 Frame = +2

Query: 2   SKRAAPYSAQKVEAPDTTWGHDMFEGHAGAHPARSNRVSSGIETGTKLLITNLDYGVSNE 181
           + R  PYS  K  AP+TTW HDMF   A A+PA++ R S+ IETGTKL I+NLDYGVSNE
Sbjct: 45  ANRITPYSVSK--APETTWQHDMFADQAAAYPAQAGRTSA-IETGTKLYISNLDYGVSNE 101

Query: 182 DIKELFAEVGDIKRASVHYDRSGRSKGTAEVVFSRRRDAELAIKRYDNVQLDG 340
           DIKELF+EVGD+KR S+HYDRSGRSKGTAEVVFSRR DA  A+KRY+NVQLDG
Sbjct: 102 DIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDG 154


>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
          Length = 281

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/113 (71%), Positives = 93/113 (82%)
 Frame = +2

Query: 2   SKRAAPYSAQKVEAPDTTWGHDMFEGHAGAHPARSNRVSSGIETGTKLLITNLDYGVSNE 181
           + R  PYS  K  AP+TTW HDMF   A A+PA++ R S+ IETGTKL I+NLDYGVSNE
Sbjct: 45  ANRITPYSVSK--APETTWQHDMFADQAAAYPAQAGRTSA-IETGTKLYISNLDYGVSNE 101

Query: 182 DIKELFAEVGDIKRASVHYDRSGRSKGTAEVVFSRRRDAELAIKRYDNVQLDG 340
           DIKELF+EVGD+KR S+HYDRSGRSKGTAEVVFSRR DA  A+KRY+NVQLDG
Sbjct: 102 DIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDG 154


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
           sativus]
          Length = 237

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/111 (68%), Positives = 90/111 (81%)
 Frame = +2

Query: 8   RAAPYSAQKVEAPDTTWGHDMFEGHAGAHPARSNRVSSGIETGTKLLITNLDYGVSNEDI 187
           RA PYS  K  AP+T W HDMF  H  A+P+   R S+ IETGTKL ++NLDYGVSNEDI
Sbjct: 47  RATPYSTSK--APETAWSHDMFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDI 103

Query: 188 KELFAEVGDIKRASVHYDRSGRSKGTAEVVFSRRRDAELAIKRYDNVQLDG 340
           KELF+EVGD+KR S++YD+SGRSKGTAE+VFSR+ DA  AIKRY+NVQLDG
Sbjct: 104 KELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDG 154


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