BLASTX nr result

ID: Atractylodes21_contig00013648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013648
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
emb|CBI19389.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arab...   143   2e-32

>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/97 (73%), Positives = 84/97 (86%)
 Frame = -1

Query: 292 NLRTRIPLEKQFETWLEKLKPGFTSYDVDEALRAQSDPDLAFDIFRWTGQQRGYKHNSTT 113
           N +T  PL+ QFE+W+  LKPGF+  DVDEALRAQSDPDLA DIFRWTGQQRGY+HN  T
Sbjct: 65  NPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHNHVT 124

Query: 112 YLTMIQIAVSGKRYQQAETLVEEIVAGACTGSVPLYN 2
           YLTMI+IAVSGKR++ AETL+EE++AGAC+ SVPLYN
Sbjct: 125 YLTMIKIAVSGKRFRHAETLIEEVIAGACSVSVPLYN 161


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/94 (73%), Positives = 79/94 (84%)
 Frame = -1

Query: 283 TRIPLEKQFETWLEKLKPGFTSYDVDEALRAQSDPDLAFDIFRWTGQQRGYKHNSTTYLT 104
           TR PLE QFETW + LKPGFT  DVD A+RAQSDPDLA DIFRWT QQR YKHN  TYLT
Sbjct: 1   TRTPLETQFETWTQNLKPGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLT 60

Query: 103 MIQIAVSGKRYQQAETLVEEIVAGACTGSVPLYN 2
           +I+I +SG+RY+QAETL+EE++AGAC  SVPLYN
Sbjct: 61  VIKILISGRRYRQAETLIEEVIAGACEISVPLYN 94


>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/90 (72%), Positives = 78/90 (86%)
 Frame = -1

Query: 292 NLRTRIPLEKQFETWLEKLKPGFTSYDVDEALRAQSDPDLAFDIFRWTGQQRGYKHNSTT 113
           N +T  PL+ QFE+W+  LKPGF+  DVDEALRAQSDPDLA DIFRWTGQQRGY+HN  T
Sbjct: 65  NPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHNHVT 124

Query: 112 YLTMIQIAVSGKRYQQAETLVEEIVAGACT 23
           YLTMI+IAVSGKR++ AETL+EE++AGAC+
Sbjct: 125 YLTMIKIAVSGKRFRHAETLIEEVIAGACS 154


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/96 (68%), Positives = 81/96 (84%)
 Frame = -1

Query: 289 LRTRIPLEKQFETWLEKLKPGFTSYDVDEALRAQSDPDLAFDIFRWTGQQRGYKHNSTTY 110
           +RT+ PLEKQFE+W++KLKPGF+  DV+EAL+AQSDPDLA D+FRWT QQRGYKHN  TY
Sbjct: 66  VRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNHLTY 125

Query: 109 LTMIQIAVSGKRYQQAETLVEEIVAGACTGSVPLYN 2
           LT+I+I +  +R   AETLVEE++AGAC  SVPLYN
Sbjct: 126 LTIIKILIYRRRCHLAETLVEEVIAGACEMSVPLYN 161


>ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
           lyrata] gi|297329430|gb|EFH59849.1| hypothetical protein
           ARALYDRAFT_899142 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/96 (69%), Positives = 78/96 (81%)
 Frame = -1

Query: 289 LRTRIPLEKQFETWLEKLKPGFTSYDVDEALRAQSDPDLAFDIFRWTGQQRGYKHNSTTY 110
           +RTR PLE QFETW++ LKPGFT+ DV  ALRAQSDPDLA DIFRWT QQRGYKHN   Y
Sbjct: 52  IRTRTPLETQFETWIQNLKPGFTNSDVVTALRAQSDPDLALDIFRWTSQQRGYKHNHEAY 111

Query: 109 LTMIQIAVSGKRYQQAETLVEEIVAGACTGSVPLYN 2
            TMI+ A++GKR +  ETL+EE++AGAC  SVPLYN
Sbjct: 112 HTMIKQAITGKRNKFVETLIEEVIAGACEMSVPLYN 147


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