BLASTX nr result

ID: Atractylodes21_contig00013560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013560
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   120   2e-25
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ACL52488.1| unknown [Zea mays]                                     118   6e-25
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   116   2e-24

>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  120 bits (300), Expect = 2e-25
 Identities = 69/113 (61%), Positives = 73/113 (64%)
 Frame = +1

Query: 1   VKAGEDIASKITAFSQQGPRTVCILSANGAISNVTLRQPAMSGGTVTYEGRFEIISLSGS 180
           VKAGEDIASKI AFSQQGPRTVCILSANGAI NVTLRQPAMSGGTVTYEGR+EIISLSGS
Sbjct: 184 VKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRYEIISLSGS 243

Query: 181 FLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPIQVVVGSFITD 339
           FLL                                     +P+QV+VGSFI D
Sbjct: 244 FLL-SENNGNRSRSGGLSVSLAGSDGRVLGGGVAGMLMAASPVQVIVGSFIAD 295


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  119 bits (299), Expect = 3e-25
 Identities = 69/113 (61%), Positives = 73/113 (64%)
 Frame = +1

Query: 1   VKAGEDIASKITAFSQQGPRTVCILSANGAISNVTLRQPAMSGGTVTYEGRFEIISLSGS 180
           VKAGEDIASKI AFSQQGPRTVCILSANGAI NVTLRQPAMSGG+VTYEGRFEIISLSGS
Sbjct: 184 VKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGS 243

Query: 181 FLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPIQVVVGSFITD 339
           FLL                                     +P+QV+VGSFI D
Sbjct: 244 FLL-SESNGSRSRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIAD 295


>gb|ACL52488.1| unknown [Zea mays]
          Length = 414

 Score =  118 bits (296), Expect = 6e-25
 Identities = 66/127 (51%), Positives = 80/127 (62%), Gaps = 3/127 (2%)
 Frame = -3

Query: 383 GGAVDGALL---DFGFFASVMKLPTTTCIGVAATNEPATPPPKTRPSEPARETXXXXXXX 213
           GG   G+ L    FGF AS MKLPTTTC GVAA + PAT PP  RPS PA  T       
Sbjct: 31  GGTDVGSRLGCSSFGFLASAMKLPTTTCTGVAAISIPATQPPTMRPSLPASATLKPPVLL 90

Query: 212 XXXXXLSASRKEPDKDMISNRPSYVTVPPDIAG*RRVTLLMAPFADRIQTVRGPCCEKAV 33
                 SAS+ EP+++ IS  PSYVT+PP++AG R V +  APFA+ +  VRGPC EKA+
Sbjct: 91  RVSPS-SASKNEPERESISKWPSYVTIPPEVAGCRSVAVHRAPFAEIMHVVRGPCWEKAI 149

Query: 32  IFEAISS 12
           I +A SS
Sbjct: 150 ILDATSS 156


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  117 bits (294), Expect = 1e-24
 Identities = 60/63 (95%), Positives = 61/63 (96%)
 Frame = +1

Query: 1   VKAGEDIASKITAFSQQGPRTVCILSANGAISNVTLRQPAMSGGTVTYEGRFEIISLSGS 180
           VKAGEDIASKI AFSQQGPRTVCILSANGAI NVTLRQPAMSGG+VTYEGRFEIISLSGS
Sbjct: 95  VKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGS 154

Query: 181 FLL 189
           FLL
Sbjct: 155 FLL 157


>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  116 bits (291), Expect = 2e-24
 Identities = 67/113 (59%), Positives = 71/113 (62%)
 Frame = +1

Query: 1   VKAGEDIASKITAFSQQGPRTVCILSANGAISNVTLRQPAMSGGTVTYEGRFEIISLSGS 180
           V  GEDIASKI AFSQQGPRTVCILSANGAI NVTLRQPAMSGGT++YEGRF+IISLSGS
Sbjct: 159 VNVGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTISYEGRFDIISLSGS 218

Query: 181 FLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPIQVVVGSFITD 339
           FLL                                     TP+QVVVGSFI D
Sbjct: 219 FLL-SEDNGSRHRTGGLSVSLAGSDGRVLGGGVAGMLTAATPVQVVVGSFIAD 270


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