BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013534
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    171   4e-41
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   171   6e-41
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   170   1e-40
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   170   1e-40
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              170   1e-40

>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/109 (71%), Positives = 91/109 (83%)
 Frame = +1

Query: 1    LGQYKVAHEEEIVTGHIWSMPKYSSKKQGELKERIKHAYSALRREFRKVFDHLGPDFDQI 180
            LGQYKV  EEE+VTGHIWSMPKYS+KKQGELKER+KHAY+ LR+EFR VF+ + PDFD +
Sbjct: 1054 LGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLL 1113

Query: 181  SEEERNASYERKASAWYQVTYHPIWVKKSLKLQEPDREGETVNLSFAWI 327
             ++E+N  YERKASAWYQVTYHP WV +SL+LQ PD    TV LSFAWI
Sbjct: 1114 PDDEKNDMYERKASAWYQVTYHPHWVARSLELQLPDAVSNTVMLSFAWI 1162


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/109 (71%), Positives = 91/109 (83%)
 Frame = +1

Query: 1    LGQYKVAHEEEIVTGHIWSMPKYSSKKQGELKERIKHAYSALRREFRKVFDHLGPDFDQI 180
            LGQYKV  EEE+VTGHIWSMPKYS+KKQGELKER+KHAY+ LR+EFR VF+ + PDFD +
Sbjct: 1054 LGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLL 1113

Query: 181  SEEERNASYERKASAWYQVTYHPIWVKKSLKLQEPDREGETVNLSFAWI 327
             ++E+N  YERKASAWYQVTYHP WV +SL+LQ PD    TV LSFAWI
Sbjct: 1114 PDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVMLSFAWI 1162


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/109 (70%), Positives = 91/109 (83%)
 Frame = +1

Query: 1    LGQYKVAHEEEIVTGHIWSMPKYSSKKQGELKERIKHAYSALRREFRKVFDHLGPDFDQI 180
            LGQYKV  EEEIVTGHIWSMPKY+SKKQGELKER+KH+Y++L++EFRKVF+   PD + +
Sbjct: 1053 LGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENL 1112

Query: 181  SEEERNASYERKASAWYQVTYHPIWVKKSLKLQEPDREGETVNLSFAWI 327
            SEEE+N  YE+KASAWY VTYHP WVKKSL+LQ+PD       LSFAWI
Sbjct: 1113 SEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWI 1161


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
            gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
            Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
            AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
            Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
            Full=RNA-directed RNA polymerase 6
            gi|12324444|gb|AAG52184.1|AC012329_11 putative
            RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
            thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
            polymerase-like protein [Arabidopsis thaliana]
            gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
            gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
            6 [Arabidopsis thaliana]
          Length = 1196

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/109 (70%), Positives = 91/109 (83%)
 Frame = +1

Query: 1    LGQYKVAHEEEIVTGHIWSMPKYSSKKQGELKERIKHAYSALRREFRKVFDHLGPDFDQI 180
            LGQYKV  EEEIVTGHIWSMPKY+SKKQGELKER+KH+Y++L++EFRKVF+   PD + +
Sbjct: 1053 LGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENL 1112

Query: 181  SEEERNASYERKASAWYQVTYHPIWVKKSLKLQEPDREGETVNLSFAWI 327
            SEEE+N  YE+KASAWY VTYHP WVKKSL+LQ+PD       LSFAWI
Sbjct: 1113 SEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWI 1161


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  170 bits (430), Expect = 1e-40
 Identities = 76/110 (69%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    LGQYKVAHEEEIVTGHIWSMPKYSSKKQGELKERIKHAYSALRREFRKVFDHLGPDFDQI 180
            LGQYKV  EEE+VTGH+WSMPKY S+KQGEL ER+KHAYS+L++EFR++F+ +  DFDQ+
Sbjct: 891  LGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQL 950

Query: 181  SEEERNASYERKASAWYQVTYHPIWVKKSLKLQEPDRE-GETVNLSFAWI 327
            +++E+N  YE+KASAWYQVTYHP WVKKSL+LQ PD   GE V LSFAWI
Sbjct: 951  TDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWI 1000