BLASTX nr result

ID: Atractylodes21_contig00012661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012661
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX00356.1| IAA13 [Solanum lycopersicum]                            57   2e-14
gb|AFP54302.1| ARF domain class transcription factor [Pyrus x br...    59   2e-14
gb|ADL36583.1| ARF domain class transcription factor [Malus x do...    59   2e-14
gb|AFZ78620.1| hypothetical protein [Populus tomentosa]                56   4e-14
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri...    60   2e-13

>gb|AEX00356.1| IAA13 [Solanum lycopersicum]
          Length = 283

 Score = 56.6 bits (135), Expect(3) = 2e-14
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 427 EKQQAKQYSWLLNGSSEFVLAYEDKERDWMLVGDVP 534
           EK+QA +   LL+GSSEFVL YEDKE DWMLVGDVP
Sbjct: 210 EKEQATKSFKLLDGSSEFVLTYEDKEGDWMLVGDVP 245



 Score = 41.2 bits (95), Expect(3) = 2e-14
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +2

Query: 224 GLPIETKVDLNAHDC*ETLGQALEIMFLKAS 316
           GLPI  KVDLNAH C E+L + LE MF K++
Sbjct: 176 GLPIGRKVDLNAHTCYESLAETLEDMFFKST 206



 Score = 28.5 bits (62), Expect(3) = 2e-14
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 132 HEKKKNSRRENENYEKIVIETGNSGFVKVDMDCL 233
           H KKK +    ++    V E G+ GFVKV+MD L
Sbjct: 144 HSKKKINHGNTKDDAASVKEKGHLGFVKVNMDGL 177


>gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
          Length = 306

 Score = 58.9 bits (141), Expect(3) = 2e-14
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 421 GREKQQAKQYSWLLNGSSEFVLAYEDKERDWMLVGDVP 534
           G + +QAK+ S LL+GSSEFVL YEDKE DWMLVGDVP
Sbjct: 231 GGDTEQAKKPSKLLDGSSEFVLTYEDKEGDWMLVGDVP 268



 Score = 41.6 bits (96), Expect(3) = 2e-14
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +2

Query: 224 GLPIETKVDLNAHDC*ETLGQALEIMFL 307
           G+PI  KVDLNAH C ETL Q LE MF+
Sbjct: 197 GIPIGRKVDLNAHSCYETLAQTLEEMFI 224



 Score = 25.4 bits (54), Expect(3) = 2e-14
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +3

Query: 135 EKKKNSRRENENY--EKIVIETGNSGFVKVDMD 227
           EK K++ ++  N   +  V E G+ GFVKV+MD
Sbjct: 164 EKSKDTSKKKINVGSKTTVKEKGHLGFVKVNMD 196


>gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
          Length = 306

 Score = 58.9 bits (141), Expect(3) = 2e-14
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 421 GREKQQAKQYSWLLNGSSEFVLAYEDKERDWMLVGDVP 534
           G + +QAK+ S LL+GSSEFVL YEDKE DWMLVGDVP
Sbjct: 231 GGDTEQAKKPSKLLDGSSEFVLTYEDKEGDWMLVGDVP 268



 Score = 41.6 bits (96), Expect(3) = 2e-14
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +2

Query: 224 GLPIETKVDLNAHDC*ETLGQALEIMFL 307
           G+PI  KVDLNAH C ETL Q LE MF+
Sbjct: 197 GIPIGRKVDLNAHSCYETLAQTLEEMFI 224



 Score = 25.4 bits (54), Expect(3) = 2e-14
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +3

Query: 135 EKKKNSRRENENY--EKIVIETGNSGFVKVDMD 227
           EK K++ ++  N   +  V E G+ GFVKV+MD
Sbjct: 164 EKSKDTSKKKINVGSKTTVKEKGHLGFVKVNMD 196


>gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
          Length = 291

 Score = 55.8 bits (133), Expect(3) = 4e-14
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +1

Query: 421 GREKQQAKQYSWLLNGSSEFVLAYEDKERDWMLVGDVP 534
           G EK+Q  + S LL+G SEFVL YEDKE DWMLVGDVP
Sbjct: 183 GGEKRQVTKPSKLLDGLSEFVLTYEDKEGDWMLVGDVP 220



 Score = 47.0 bits (110), Expect(3) = 4e-14
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +2

Query: 224 GLPIETKVDLNAHDC*ETLGQALEIMFLKASANSTSI 334
           G+PI  KVDLNAH C ETL QALE MFL+++    SI
Sbjct: 146 GIPIGRKVDLNAHACYETLAQALEEMFLRSATTINSI 182



 Score = 22.3 bits (46), Expect(3) = 4e-14
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 189 ETGNSGFVKVDMD 227
           E G+ GFVKV+MD
Sbjct: 133 EKGHLGFVKVNMD 145


>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
           gi|223532214|gb|EEF34018.1| Auxin-responsive protein
           IAA13, putative [Ricinus communis]
          Length = 318

 Score = 60.5 bits (145), Expect(3) = 2e-13
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +1

Query: 418 SGREKQQAKQYSWLLNGSSEFVLAYEDKERDWMLVGDVP 534
           +G EKQQ+ + S LL+GSSEFVL YEDKE DWMLVGDVP
Sbjct: 242 TGGEKQQSTKPSKLLDGSSEFVLTYEDKEGDWMLVGDVP 280



 Score = 39.7 bits (91), Expect(3) = 2e-13
 Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +2

Query: 224 GLPIETKVDLNAHDC*ETLGQALEIMFLKA--SANSTSIHK 340
           G+PI  KVDLNAH   ETL Q LE MF ++  S NST   K
Sbjct: 206 GIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEK 246



 Score = 22.3 bits (46), Expect(3) = 2e-13
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 189 ETGNSGFVKVDMD 227
           E G+ GFVKV+MD
Sbjct: 193 EKGHLGFVKVNMD 205


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