BLASTX nr result

ID: Atractylodes21_contig00012623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012623
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530606.1| nuclear protein skip, putative [Ricinus comm...    62   4e-08
ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-l...    60   1e-07
ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [...    58   9e-07
ref|XP_002454583.1| hypothetical protein SORBIDRAFT_04g033860 [S...    55   5e-06

>ref|XP_002530606.1| nuclear protein skip, putative [Ricinus communis]
           gi|223529854|gb|EEF31786.1| nuclear protein skip,
           putative [Ricinus communis]
          Length = 238

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/35 (85%), Positives = 34/35 (97%), Gaps = 1/35 (2%)
 Frame = -3

Query: 271 KVGSGGTMKASGGSSTREGYE-GSGRSRIGFERGR 170
           KVGSGGTM+ASGGSSTR+GY+ GSGR+RIGFERGR
Sbjct: 204 KVGSGGTMRASGGSSTRDGYDGGSGRTRIGFERGR 238


>ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus]
           gi|449487951|ref|XP_004157882.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 1 [Cucumis
           sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 2 [Cucumis
           sativus]
          Length = 605

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
 Frame = -3

Query: 271 KVGSGGTMKASGGSSTREGYE-GSGRSRIGFERG 173
           KVGSGGTM+ASGGSSTR+GY+ GSGR+RIGFERG
Sbjct: 571 KVGSGGTMRASGGSSTRDGYDGGSGRTRIGFERG 604


>ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|222832076|gb|EEE70553.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/35 (82%), Positives = 34/35 (97%), Gaps = 1/35 (2%)
 Frame = -3

Query: 271 KVGSGGTMKASGGSSTREGYE-GSGRSRIGFERGR 170
           KVGSGGTM+ASGGSSTR+G++ GSGR+RIGFERGR
Sbjct: 562 KVGSGGTMRASGGSSTRDGHDGGSGRTRIGFERGR 596


>ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]
           gi|449523876|ref|XP_004168949.1| PREDICTED:
           puff-specific protein Bx42-like [Cucumis sativus]
          Length = 603

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/34 (82%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
 Frame = -3

Query: 271 KVGSGGTMKASGGSSTREGYE-GSGRSRIGFERG 173
           KVGSGGTM+A GGSS R+GYE GSGR+RIGFERG
Sbjct: 569 KVGSGGTMRAGGGSSMRDGYEGGSGRTRIGFERG 602


>ref|XP_002454583.1| hypothetical protein SORBIDRAFT_04g033860 [Sorghum bicolor]
           gi|241934414|gb|EES07559.1| hypothetical protein
           SORBIDRAFT_04g033860 [Sorghum bicolor]
          Length = 609

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%), Gaps = 1/35 (2%)
 Frame = -3

Query: 271 KVGSGGTMKASGGSSTREGYE-GSGRSRIGFERGR 170
           K+G GGTMKASGGSS R+ Y+ GSGRSRI FERGR
Sbjct: 575 KIGGGGTMKASGGSSMRDDYDGGSGRSRINFERGR 609


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