BLASTX nr result

ID: Atractylodes21_contig00012590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012590
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    85   7e-15
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    82   3e-14
ref|NP_192272.1| root nodule development protein-like protein [A...    79   4e-13
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    77   1e-12
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    77   2e-12

>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/116 (40%), Positives = 63/116 (54%)
 Frame = +1

Query: 1   RESIETAGRYCLSLKTLKVNQEAWRLQGGVTKTIAKHNEIAIAXXXXXXXXXXXXXXXXS 180
           R+ +E  GR C  LKTLK N + +R      +   + +E A A                 
Sbjct: 157 RDPLEAVGRCCRHLKTLKFNMKGYR------RPHIECDEEAFAIAETMPTLHHLQLFGNK 210

Query: 181 MLSIGLQVILDGCCHLKSLDLRRCFFIDLKGDLGKRCLEHIKCLKLPDDSLEGCPY 348
           + + GL  ILDGC HL+SLDLR+CF ++L G LGKRC E IK L+LP D  + CP+
Sbjct: 211 LTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDPTDDCPF 266


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/115 (41%), Positives = 62/115 (53%)
 Frame = +1

Query: 4   ESIETAGRYCLSLKTLKVNQEAWRLQGGVTKTIAKHNEIAIAXXXXXXXXXXXXXXXXSM 183
           ES++  G+ C +LKTLK+N E              +NE A+A                 +
Sbjct: 484 ESLKVVGQSCPNLKTLKLNSEP----DPKFNDDEFNNEEALAIAESMPELRHLQLFGNIL 539

Query: 184 LSIGLQVILDGCCHLKSLDLRRCFFIDLKGDLGKRCLEHIKCLKLPDDSLEGCPY 348
            ++GL  ILDGC HL+ LDLR+C  +DL GDL KRC+E IK LK P DS  G PY
Sbjct: 540 TNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVERIKDLKRPTDSTAGHPY 594



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/113 (36%), Positives = 58/113 (51%)
 Frame = +1

Query: 4   ESIETAGRYCLSLKTLKVNQEAWRLQGGVTKTIAKHNEIAIAXXXXXXXXXXXXXXXXSM 183
           E +   G+ C  L TLK+N+   R +      +  HN IAIA                ++
Sbjct: 154 ECLSVVGQSCPHLTTLKLNR---RPRVEFVINMRDHNAIAIAESMPELRHLQLLGN--AL 208

Query: 184 LSIGLQVILDGCCHLKSLDLRRCFFIDLKGDLGKRCLEHIKCLKLPDDSLEGC 342
            + GL  ILD C HL  LDLR+C+ I+L  D  K+C+E IK L+ P+DS+  C
Sbjct: 209 TNTGLNAILDSCTHLDHLDLRQCYNINLVEDFMKQCVERIKYLRCPNDSIADC 261


>ref|NP_192272.1| root nodule development protein-like protein [Arabidopsis thaliana]
           gi|4263050|gb|AAD15319.1| putative nodulin [Arabidopsis
           thaliana] gi|7270686|emb|CAB77848.1| putative nodulin
           [Arabidopsis thaliana] gi|67633732|gb|AAY78790.1| root
           nodule development protein-related [Arabidopsis
           thaliana] gi|332656947|gb|AEE82347.1| root nodule
           development protein-like protein [Arabidopsis thaliana]
          Length = 220

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/115 (40%), Positives = 62/115 (53%)
 Frame = +1

Query: 4   ESIETAGRYCLSLKTLKVNQEAWRLQGGVTKTIAKHNEIAIAXXXXXXXXXXXXXXXXSM 183
           +++E  G  CL LKTLK+N + ++  G        H+ + IA                S 
Sbjct: 103 KNLEAIGFACLHLKTLKLNCQGFKFPGFTYD----HDALGIAKRMPELRCLQLFGNRVS- 157

Query: 184 LSIGLQVILDGCCHLKSLDLRRCFFIDLKGDLGKRCLEHIKCLKLPDDSLEGCPY 348
             +GL  I DGC HL+ LDLR+CF I+L GDL KRC+E IK L+ P+DS    PY
Sbjct: 158 -DVGLNAIFDGCPHLEHLDLRQCFNINLVGDLEKRCMERIKDLRRPNDSTADYPY 211


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/115 (37%), Positives = 61/115 (53%)
 Frame = +1

Query: 4   ESIETAGRYCLSLKTLKVNQEAWRLQGGVTKTIAKHNEIAIAXXXXXXXXXXXXXXXXSM 183
           + +E  GR C  LKT K N E +R      +   + ++ A +                 M
Sbjct: 162 DPLEAIGRCCPQLKTFKFNIEGFR------RPRMEFDDEAFSIAKTMPGLRHLMLVGNKM 215

Query: 184 LSIGLQVILDGCCHLKSLDLRRCFFIDLKGDLGKRCLEHIKCLKLPDDSLEGCPY 348
              GL+ ILDGC HL+SLD+R+CF + L+G LGKRC E IK L+LP D+ +  P+
Sbjct: 216 SKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGKRCREQIKYLRLPYDATDDYPF 270


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
 Frame = +1

Query: 13  ETAGRYCLSLKTLKVNQEAWR---LQGGVTKTIAKHNEIAIAXXXXXXXXXXXXXXXXSM 183
           E  GR C  LKTLK N + +R   +Q       A  +  A A                 M
Sbjct: 163 EPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDNEAFAIAKYMPGLRHLQLIGNEM 222

Query: 184 LSIGLQVILDGCCHLKSLDLRRCFFIDLKGDLGKRCLEHIKCLKLPDDSLEGCPY 348
            + GL  +LDGC HL+SLD+RRCF ++L G LGKRC E IK  +LP D+ +  P+
Sbjct: 223 TNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIKYFRLPHDATDDYPF 277


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