BLASTX nr result

ID: Atractylodes21_contig00012416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012416
         (1885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   230   2e-77
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   233   5e-77
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   231   1e-76
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   231   2e-76
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-75

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  230 bits (587), Expect(2) = 2e-77
 Identities = 124/278 (44%), Positives = 164/278 (58%), Gaps = 5/278 (1%)
 Frame = +3

Query: 402  AVVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGL 581
            AVVITDK+TGRSKGYGFVTF D E+A+RAC DP P+IDGRRANCNLASLGR +PS++YG 
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGR 120

Query: 582  LRPAGHYFWSSQNPGGPFVGSSSYRQPVLYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPY 758
            LRP   Y  S     G +VG+  Y+QPV Y YQQ + Y  YGY AYGPEYV+PQ  YNPY
Sbjct: 121  LRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPY 180

Query: 759  AGQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXXYRAIQGMVTPGPNVLPYGRPNLSGAT 938
             GQ + Q+ G+PG VN   + YGQ+         Y  +QG   PG   + +G  +++  +
Sbjct: 181  PGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAIS 240

Query: 939  TDIVPMPPTPYLTGVAPPSFGQARSIVPAYPSPFSKSAGSE*REFNW*TNWSLSEDDYHL 1118
            T  +P    PY TG+A P   Q + IVPA+   F + +G +          +  E D  +
Sbjct: 241  TSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPD--------QTTGYEKDETV 292

Query: 1119 VLRQTSIFSLDE----FSLLSRGHEKS*TRVKSSQSEL 1220
            VLR    F+  +    F ++   H  +  R + S+S L
Sbjct: 293  VLRDGDSFASSQPSSGFEIIKVIHSHAHQRSRMSESLL 330



 Score = 87.8 bits (216), Expect(2) = 2e-77
 Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 6/62 (9%)
 Frame = +1

Query: 163 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 324
           AYQPI G      +  G QFLN PFGDTT+TKVFVGGLAWET SET+  YF+QFG+ILEA
Sbjct: 2   AYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEA 61

Query: 325 VV 330
           VV
Sbjct: 62  VV 63


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  233 bits (593), Expect(2) = 5e-77
 Identities = 118/222 (53%), Positives = 145/222 (65%), Gaps = 2/222 (0%)
 Frame = +3

Query: 402  AVVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGL 581
            AVVITDK+TGRSKGYGFVTF D EAA+RACADP+PVIDGRRANCNLASLGR +P L YG 
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYGR 120

Query: 582  LRPAGHYFWSSQNPGGPFVGSSSYRQPVLYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPY 758
            +RPA  Y  S Q   G +VG   Y+QPV Y YQQ   Y  YGY +YGPEY++PQ  YNPY
Sbjct: 121  IRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYNPY 180

Query: 759  AGQHHPQMLGLPGVVNPNA-FSYGQMXXXXXXXXXYRAIQGMVTPGPNVLPYGRPNLSGA 935
             GQ + Q+ G+PG VN    + YGQ+         Y A+QG   PG  ++PYG  N++  
Sbjct: 181  MGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVNAI 240

Query: 936  TTDIVPMPPTPYLTGVAPPSFGQARSIVPAYPSPFSKSAGSE 1061
            TT  +P     Y +G+A P  GQ + IVPA    F + +G +
Sbjct: 241  TTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPD 282



 Score = 84.0 bits (206), Expect(2) = 5e-77
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 6/62 (9%)
 Frame = +1

Query: 163 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 324
           AYQ ++G      +  G Q LN PFGDTT+TKVFVGGLAWET SET+  YFDQFG+ILEA
Sbjct: 2   AYQAMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEA 61

Query: 325 VV 330
           VV
Sbjct: 62  VV 63


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  231 bits (589), Expect(2) = 1e-76
 Identities = 116/222 (52%), Positives = 147/222 (66%), Gaps = 2/222 (0%)
 Frame = +3

Query: 402  AVVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGL 581
            AVVITDK+TGRSKGYGFVTF + +AA+RACADPTP+IDGRRANCNLASLGR +P L YG 
Sbjct: 61   AVVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLPYGR 120

Query: 582  LRPAGHYFWSSQNPGGPFVGSSSYRQPVLYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPY 758
             RPA  Y  S Q P G +VGS  Y+QPV YGYQQ   Y+ YGY AYGPEYV+ Q  YNPY
Sbjct: 121  PRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYNPY 180

Query: 759  A-GQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXXYRAIQGMVTPGPNVLPYGRPNLSGA 935
            A G  + Q+ G+PG VN   + YGQ+         Y ++ G   PG  ++ +G P+++  
Sbjct: 181  ATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAI 240

Query: 936  TTDIVPMPPTPYLTGVAPPSFGQARSIVPAYPSPFSKSAGSE 1061
            TT  +P    PY TG+A     Q++ IVPA    + + +GS+
Sbjct: 241  TTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSD 282



 Score = 84.3 bits (207), Expect(2) = 1e-76
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 6/62 (9%)
 Frame = +1

Query: 163 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 324
           AYQ I G      +  G Q++N PFGDTT+TKVFVGGLAWET SET+  YF+QFGDILEA
Sbjct: 2   AYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEA 61

Query: 325 VV 330
           VV
Sbjct: 62  VV 63


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  231 bits (590), Expect(2) = 2e-76
 Identities = 120/229 (52%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
 Frame = +3

Query: 402  AVVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGL 581
            AVVITDK+TGRSKGYGFVTF D EAA+RACADPTPVIDGRRANCNLASLGR +P L YG+
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGI 120

Query: 582  -------LRPAGHYFWSSQNPGGPFVGSSSYRQ-PVLYGYQQ-YPYSLYGYPAYGPEYVF 734
                   +RPA  Y  S Q   G +VG   Y+Q PV Y YQQ   Y  YGY  YGPEY++
Sbjct: 121  VLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIY 180

Query: 735  PQVPYNPYAGQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXXYRAIQGMVTPGPNVLPYG 914
            PQ  YNPY GQ + Q+ G+PG VN   + YGQ+         Y AIQG   PG  ++PYG
Sbjct: 181  PQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYG 240

Query: 915  RPNLSGATTDIVPMPPTPYLTGVAPPSFGQARSIVPAYPSPFSKSAGSE 1061
              N++  TT  +P     Y +G+A P  GQ + IVPA+   F + +G +
Sbjct: 241  GSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPD 289



 Score = 82.8 bits (203), Expect(2) = 2e-76
 Identities = 41/62 (66%), Positives = 46/62 (74%), Gaps = 6/62 (9%)
 Frame = +1

Query: 163 AYQPIR------GNGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 324
           AYQ I+       +  G Q LN PFGDTT+TKVFVGGLAWET SET+  YFDQFG+ILEA
Sbjct: 2   AYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEA 61

Query: 325 VV 330
           VV
Sbjct: 62  VV 63


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  226 bits (577), Expect(2) = 3e-75
 Identities = 119/223 (53%), Positives = 144/223 (64%), Gaps = 3/223 (1%)
 Frame = +3

Query: 402  AVVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTY-G 578
            AVVITDK+TGRSKGYGFVTF + EAA+RACADPTP+IDGRRANCNLASLGR +P   Y G
Sbjct: 61   AVVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQPYVG 120

Query: 579  LLRPAGHYFWSSQNPGGPFVGSSSYRQPVLYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNP 755
             LRPA  Y  S Q P G + GS  Y+QPV YGYQQ   Y  YGY AYGPEYV+ Q  YNP
Sbjct: 121  RLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYNP 180

Query: 756  Y-AGQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXXYRAIQGMVTPGPNVLPYGRPNLSG 932
            Y AGQ + Q+ G+PG VN   + YGQ          Y  +QG   PG +++ +G P ++ 
Sbjct: 181  YAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVNA 240

Query: 933  ATTDIVPMPPTPYLTGVAPPSFGQARSIVPAYPSPFSKSAGSE 1061
             TT  +P    PY TG+A     Q + IVPA    +  S+GS+
Sbjct: 241  MTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSD 283



 Score = 84.0 bits (206), Expect(2) = 3e-75
 Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 6/62 (9%)
 Frame = +1

Query: 163 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 324
           AYQ + G      +  G Q++N PFGDTT+TKVFVGGLAWET SET+  YF+QFGDILEA
Sbjct: 2   AYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEA 61

Query: 325 VV 330
           VV
Sbjct: 62  VV 63


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