BLASTX nr result

ID: Atractylodes21_contig00012324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012324
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chlorop...   242   5e-62
ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatul...   240   1e-61
ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arab...   238   6e-61
ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|1...   238   6e-61
emb|CBI17129.3| unnamed protein product [Vitis vinifera]              233   2e-59

>ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera]
          Length = 195

 Score =  242 bits (617), Expect = 5e-62
 Identities = 125/175 (71%), Positives = 141/175 (80%)
 Frame = +2

Query: 128 RTLTRNINEGIRISDKSSVFVILAQKKAKKTRKIILTEDVIDVGKKGQLLDVKAGFYRNF 307
           +T   N N+  + SD   VFV++AQKKAKK RKIIL EDV ++GKKGQLLDVKAG+YRN+
Sbjct: 17  QTSVNNFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNY 76

Query: 308 LHPSGKAQIVTPVLLXXXXXXXXXXXXXXQRVKEEALQLARIFETVGAFKVKRKGGKGKQ 487
           L P G AQIVTP+LL              +RVKEEA Q+A +FETVGAFKVKRKGGKGKQ
Sbjct: 77  LQPMGMAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQ 136

Query: 488 IFGSVTAQDLVDIIKAQLQRDIDKRIVSLPEIRETGEYIAELKLHPEVSAEVRLN 652
           IFGSVTAQDL DIIKAQLQRD+DKRIVSLPEIRETGEY+AELKLHPEV+A VRLN
Sbjct: 137 IFGSVTAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLN 191


>ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatula]
           gi|217069924|gb|ACJ83322.1| unknown [Medicago
           truncatula] gi|355507380|gb|AES88522.1| 50S ribosomal
           protein L9 [Medicago truncatula]
           gi|388495282|gb|AFK35707.1| unknown [Medicago
           truncatula]
          Length = 192

 Score =  240 bits (613), Expect = 1e-61
 Identities = 125/174 (71%), Positives = 144/174 (82%)
 Frame = +2

Query: 131 TLTRNINEGIRISDKSSVFVILAQKKAKKTRKIILTEDVIDVGKKGQLLDVKAGFYRNFL 310
           + T N+N   + S+K+S F+I AQKKAKKTRKIIL ED+++VGKKG+LLDVKAGF+RN+L
Sbjct: 15  SFTSNLNTSSQFSNKTSRFLIFAQKKAKKTRKIILKEDILNVGKKGELLDVKAGFFRNYL 74

Query: 311 HPSGKAQIVTPVLLXXXXXXXXXXXXXXQRVKEEALQLARIFETVGAFKVKRKGGKGKQI 490
            PSGKAQI T  LL              QRVKEEALQLA+I E+VGAFKVKRKGGKGKQI
Sbjct: 75  FPSGKAQIATADLLKELKIEEERIEAEKQRVKEEALQLAQILESVGAFKVKRKGGKGKQI 134

Query: 491 FGSVTAQDLVDIIKAQLQRDIDKRIVSLPEIRETGEYIAELKLHPEVSAEVRLN 652
           FGSVTAQDLVDIIKAQLQR++DKRIV LPEIRETGEYIAELKLHPEV+A+V +N
Sbjct: 135 FGSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLHPEVTAKVSVN 188


>ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arabidopsis lyrata subsp.
           lyrata] gi|297321539|gb|EFH51960.1| hypothetical protein
           ARALYDRAFT_484888 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score =  238 bits (608), Expect = 6e-61
 Identities = 121/168 (72%), Positives = 142/168 (84%)
 Frame = +2

Query: 149 NEGIRISDKSSVFVILAQKKAKKTRKIILTEDVIDVGKKGQLLDVKAGFYRNFLHPSGKA 328
           NE +++S++   F +++QKKAKK RK+IL EDV D+GK+GQLLDVKAGF+RNFL P+GKA
Sbjct: 26  NETLKVSERRFKFEVVSQKKAKKLRKVILKEDVTDLGKQGQLLDVKAGFFRNFLLPTGKA 85

Query: 329 QIVTPVLLXXXXXXXXXXXXXXQRVKEEALQLARIFETVGAFKVKRKGGKGKQIFGSVTA 508
           Q++TP+LL              QRVKEEA QLA +FETVGAFKVKRKGGKGKQIFGSVTA
Sbjct: 86  QLMTPLLLKELKMEDERIEAEKQRVKEEAQQLALVFETVGAFKVKRKGGKGKQIFGSVTA 145

Query: 509 QDLVDIIKAQLQRDIDKRIVSLPEIRETGEYIAELKLHPEVSAEVRLN 652
           QDLVDIIKAQLQRDIDKR+VSLPEIRETGEYIAELKLHP+V+A VR+N
Sbjct: 146 QDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIAELKLHPDVTARVRIN 193


>ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|118488503|gb|ABK96065.1|
           unknown [Populus trichocarpa]
           gi|222873559|gb|EEF10690.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  238 bits (608), Expect = 6e-61
 Identities = 125/168 (74%), Positives = 140/168 (83%)
 Frame = +2

Query: 149 NEGIRISDKSSVFVILAQKKAKKTRKIILTEDVIDVGKKGQLLDVKAGFYRNFLHPSGKA 328
           NE  +  DK    ++LAQKKAKKTRKIIL EDV D+GKKGQL+DVKAGFYRNFL P+GKA
Sbjct: 27  NEISKFPDKRIPMLVLAQKKAKKTRKIILKEDVTDLGKKGQLVDVKAGFYRNFLLPTGKA 86

Query: 329 QIVTPVLLXXXXXXXXXXXXXXQRVKEEALQLARIFETVGAFKVKRKGGKGKQIFGSVTA 508
           QIVTP L+              +RVKEEA QLA IFETVGAFKVKRKGGKG+QIFG+VTA
Sbjct: 87  QIVTPGLVKEMRMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGRQIFGTVTA 146

Query: 509 QDLVDIIKAQLQRDIDKRIVSLPEIRETGEYIAELKLHPEVSAEVRLN 652
           QDLVDIIKAQ+QRD+DKRIVSLP+IRETGEYIAELKLHPEV+A+VRLN
Sbjct: 147 QDLVDIIKAQIQRDVDKRIVSLPDIRETGEYIAELKLHPEVTAQVRLN 194


>emb|CBI17129.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  233 bits (594), Expect = 2e-59
 Identities = 120/157 (76%), Positives = 133/157 (84%)
 Frame = +2

Query: 182 VFVILAQKKAKKTRKIILTEDVIDVGKKGQLLDVKAGFYRNFLHPSGKAQIVTPVLLXXX 361
           VFV++AQKKAKK RKIIL EDV ++GKKGQLLDVKAG+YRN+L P G AQIVTP+LL   
Sbjct: 2   VFVVVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEM 61

Query: 362 XXXXXXXXXXXQRVKEEALQLARIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQL 541
                      +RVKEEA Q+A +FETVGAFKVKRKGGKGKQIFGSVTAQDL DIIKAQL
Sbjct: 62  RMEEERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQL 121

Query: 542 QRDIDKRIVSLPEIRETGEYIAELKLHPEVSAEVRLN 652
           QRD+DKRIVSLPEIRETGEY+AELKLHPEV+A VRLN
Sbjct: 122 QRDVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLN 158


Top