BLASTX nr result

ID: Atractylodes21_contig00012314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012314
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510728.1| RNA binding protein, putative [Ricinus commu...   137   4e-30
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   135   2e-29
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   125   1e-26
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   124   3e-26
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25

>ref|XP_002510728.1| RNA binding protein, putative [Ricinus communis]
           gi|223551429|gb|EEF52915.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 325

 Score =  137 bits (344), Expect = 4e-30
 Identities = 67/110 (60%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
 Frame = -1

Query: 895 GIYNPYVGQQYLQIYGVPGTVNTQVYPYNQMA----ASGGYTALQSYTMPGQPMVQYGAP 728
           G+YNPY  QQYLQIYGVPGTVN  VYPY Q+        GYTA+Q + MPG  +VQ+  P
Sbjct: 149 GVYNPYAAQQYLQIYGVPGTVNAAVYPYGQLGQTLPGGHGYTAVQGFAMPGHQIVQFSGP 208

Query: 727 SVNGITSS-IQTIHAPYPTGVAAPIPGQ-NFIIPAPSQFIQGGGSGQNAG 584
           SVN IT+S + TI APY TG+AAP+P Q  FI+PAPSQ++QG GS Q AG
Sbjct: 209 SVNAITTSPMPTIQAPYATGLAAPVPAQPQFIVPAPSQYMQGSGSDQTAG 258


>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  135 bits (339), Expect = 2e-29
 Identities = 70/115 (60%), Positives = 80/115 (69%), Gaps = 7/115 (6%)
 Frame = -1

Query: 895 GIYNPYVGQQYLQIYGVPGTVNTQVYPYNQMA----ASGGYTALQSYTMPGQPMVQYGAP 728
           G+YNPY GQQYLQIYGVPGTVNT +YPY Q+     +S GYT +Q Y MPG   +Q+G  
Sbjct: 175 GVYNPYPGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGS 234

Query: 727 SVNGI-TSSIQTIHAPYPTGVAAPIPGQ-NFIIPAPS-QFIQGGGSGQNAG*TSD 572
           SVN I TS I TI APYPTG+AAP+P Q  FI+PA S QFIQG G  Q  G   D
Sbjct: 235 SVNAISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTTGYEKD 289


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score =  125 bits (315), Expect = 1e-26
 Identities = 64/110 (58%), Positives = 80/110 (72%), Gaps = 7/110 (6%)
 Frame = -1

Query: 892 IYNPYVGQQYLQIYGVPGTVNTQVYPYNQMA----ASGGYTALQSYTMPGQPMVQYGAPS 725
           +YNPY+GQQYLQIYGVPG VNT VYPY Q+     +  GY+A+Q YT+PG  +V YG  +
Sbjct: 184 LYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGGSN 243

Query: 724 VNGITSS-IQTIHAPYPTGVAAPIPGQ-NFIIPAPS-QFIQGGGSGQNAG 584
           VN IT+S +  I A YP+G+AAP+PGQ  FI+PA S QF+QG G  Q AG
Sbjct: 244 VNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTAG 293


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  124 bits (311), Expect = 3e-26
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 8/111 (7%)
 Frame = -1

Query: 892 IYNPYVGQQYLQIYGVPGTVN-TQVYPYNQ----MAASGGYTALQSYTMPGQPMVQYGAP 728
           +YNPY+GQQYLQIYGVPG VN T +YPY Q    + +  GY+A+Q YT+PG  +V YG  
Sbjct: 176 LYNPYMGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGS 235

Query: 727 SVNGITSS-IQTIHAPYPTGVAAPIPGQ-NFIIPAPS-QFIQGGGSGQNAG 584
           +VN IT+S +  I A YP+G+AAP+PGQ  FI+PAPS QF+QG G  Q AG
Sbjct: 236 NVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTAG 286


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  122 bits (306), Expect = 1e-25
 Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 8/112 (7%)
 Frame = -1

Query: 895 GIYNPYV-GQQYLQIYGVPGTVNTQVYPYNQMA----ASGGYTALQSYTMPGQPMVQYGA 731
           G YNPY  G QYLQIYGVPGTVN+ +YPY Q++       GYT++  Y +PG  +VQ+G 
Sbjct: 175 GAYNPYATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGG 234

Query: 730 PSVNGI-TSSIQTIHAPYPTGVAAPIPGQN-FIIPAPS-QFIQGGGSGQNAG 584
           PSVN I TSS+ TI APY TG+AA +P Q+ FI+PAPS Q++QG GS Q  G
Sbjct: 235 PSVNAITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQTTG 286


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