BLASTX nr result

ID: Atractylodes21_contig00012304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012304
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like...   151   6e-35
ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like...   148   4e-34
ref|XP_002519321.1| conserved hypothetical protein [Ricinus comm...   144   8e-33
ref|XP_003538361.1| PREDICTED: rRNA-processing protein fcf2-like...   144   1e-32
ref|XP_003517463.1| PREDICTED: rRNA-processing protein fcf2-like...   143   1e-32

>ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like [Cucumis sativus]
           gi|449523942|ref|XP_004168982.1| PREDICTED:
           rRNA-processing protein fcf2-like [Cucumis sativus]
          Length = 197

 Score =  151 bits (381), Expect = 6e-35
 Identities = 81/137 (59%), Positives = 93/137 (67%)
 Frame = -1

Query: 413 KSPNVSESSLVYKPMSELVDGLFXXXXXXXXXXXXXXXXXXDTTGKNWFDMPAPTLTPEX 234
           KS + +E+ LV+K  SELVDGLF                  DT G+NWFDMPA T+TPE 
Sbjct: 30  KSNSQAENGLVWKSNSELVDGLFVPPNNPKKLNKLLRKQVSDTAGRNWFDMPAKTMTPEV 89

Query: 233 XXXXXXXXLRNVIDPKRHYKKGDSKLNVFPKYFQVGTVVEPVSEYFTSRLTKKERKASLA 54
                   LR+VIDPKRHYKKGDSK    PKYFQVGTVVE   ++F+ RLTKKERKA+LA
Sbjct: 90  EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLA 149

Query: 53  DELLSDQSLKVYRKRKV 3
           DELLSDQ+L  YRKRKV
Sbjct: 150 DELLSDQALTQYRKRKV 166


>ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like isoform 1 [Vitis
           vinifera] gi|359477274|ref|XP_003631957.1| PREDICTED:
           rRNA-processing protein fcf2-like isoform 2 [Vitis
           vinifera]
          Length = 198

 Score =  148 bits (374), Expect = 4e-34
 Identities = 81/139 (58%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
 Frame = -1

Query: 413 KSPNVSESS--LVYKPMSELVDGLFXXXXXXXXXXXXXXXXXXDTTGKNWFDMPAPTLTP 240
           KS NV+E+S   ++KP SELVDGLF                  DTTG  WFDMPAPT+TP
Sbjct: 29  KSENVAENSGASLWKPDSELVDGLFVPPNNPRKVNKLLRKQVKDTTGTKWFDMPAPTITP 88

Query: 239 EXXXXXXXXXLRNVIDPKRHYKKGDSKLNVFPKYFQVGTVVEPVSEYFTSRLTKKERKAS 60
           E         LR+ IDPKRHYKK DSK    PKYFQVGTV+E  S++F+ RLTKKERKAS
Sbjct: 89  ELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQVGTVIESASDFFSGRLTKKERKAS 148

Query: 59  LADELLSDQSLKVYRKRKV 3
           LADELLS+ S   YRKRKV
Sbjct: 149 LADELLSNSSFADYRKRKV 167


>ref|XP_002519321.1| conserved hypothetical protein [Ricinus communis]
           gi|223541636|gb|EEF43185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  144 bits (363), Expect = 8e-33
 Identities = 74/137 (54%), Positives = 91/137 (66%)
 Frame = -1

Query: 413 KSPNVSESSLVYKPMSELVDGLFXXXXXXXXXXXXXXXXXXDTTGKNWFDMPAPTLTPEX 234
           KS +  ESS ++K  +EL+DGLF                  DT GKNWFDMPAPT+TPE 
Sbjct: 33  KSKHQPESSALWKSNAELIDGLFVPPNNPAKFNKLLKSQAKDTLGKNWFDMPAPTMTPEL 92

Query: 233 XXXXXXXXLRNVIDPKRHYKKGDSKLNVFPKYFQVGTVVEPVSEYFTSRLTKKERKASLA 54
                   LR+V+DPKRHYKK + K    PKYFQVGTVVE  ++YF+ RLTKKERK +LA
Sbjct: 93  KKDLQLLKLRSVLDPKRHYKKSELKSKALPKYFQVGTVVESATDYFSGRLTKKERKPTLA 152

Query: 53  DELLSDQSLKVYRKRKV 3
           +E+LSD++L  YRKRKV
Sbjct: 153 EEILSDRTLAAYRKRKV 169


>ref|XP_003538361.1| PREDICTED: rRNA-processing protein fcf2-like [Glycine max]
          Length = 198

 Score =  144 bits (362), Expect = 1e-32
 Identities = 77/135 (57%), Positives = 86/135 (63%)
 Frame = -1

Query: 407 PNVSESSLVYKPMSELVDGLFXXXXXXXXXXXXXXXXXXDTTGKNWFDMPAPTLTPEXXX 228
           P    SS V K  SELVDGLF                  DT GKNWF+MPA T+TPE   
Sbjct: 32  PQTEASSTVRKSSSELVDGLFVPPNDPKKLNKLLRKQAKDTAGKNWFNMPAQTITPELQK 91

Query: 227 XXXXXXLRNVIDPKRHYKKGDSKLNVFPKYFQVGTVVEPVSEYFTSRLTKKERKASLADE 48
                 LR  +DPKRHYKKGDSK    PKYFQVGTVV+   ++F+ RLTKKERKA+LADE
Sbjct: 92  DLKLLKLRAALDPKRHYKKGDSKSKTLPKYFQVGTVVDSPLDFFSGRLTKKERKATLADE 151

Query: 47  LLSDQSLKVYRKRKV 3
           LLSDQ+L  YRKRKV
Sbjct: 152 LLSDQNLAAYRKRKV 166


>ref|XP_003517463.1| PREDICTED: rRNA-processing protein fcf2-like [Glycine max]
          Length = 199

 Score =  143 bits (361), Expect = 1e-32
 Identities = 78/140 (55%), Positives = 89/140 (63%)
 Frame = -1

Query: 422 SNGKSPNVSESSLVYKPMSELVDGLFXXXXXXXXXXXXXXXXXXDTTGKNWFDMPAPTLT 243
           S+ K    + SS V K  SELVDGLF                  DT GKNWF+MPA T+T
Sbjct: 28  SHTKPQTEASSSTVRKSSSELVDGLFVPPNDPRKLNKLLRKQAKDTAGKNWFNMPAQTIT 87

Query: 242 PEXXXXXXXXXLRNVIDPKRHYKKGDSKLNVFPKYFQVGTVVEPVSEYFTSRLTKKERKA 63
           PE         LR  +DPKRHYKKGDSK    PKYFQVGTVV+   ++F+ RLTKKERKA
Sbjct: 88  PELQKDLKLLKLRAALDPKRHYKKGDSKSKTLPKYFQVGTVVDSPLDFFSGRLTKKERKA 147

Query: 62  SLADELLSDQSLKVYRKRKV 3
           +LADELLSDQ+L  YRKRKV
Sbjct: 148 TLADELLSDQNLAAYRKRKV 167


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