BLASTX nr result

ID: Atractylodes21_contig00012303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012303
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_003623407.1| F-box/kelch-repeat protein [Medicago truncat...    80   1e-13
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]    78   7e-13
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...    77   1e-12

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 60/155 (38%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
 Frame = -2

Query: 493 RLPAKSLGRFRCVSKDWLSLISEPQFIKTH----QNAHNRNHL-IFVXXXXXXXXXXXXX 329
           RLP K L RF+CVSK W SLIS P+F+K H    +   N NH  IF+             
Sbjct: 19  RLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDPEAY 78

Query: 328 HEA--VLTPNKLRFESHHLDFTF---YGSCNGLVLLSAHEFDGVHTLVVLNPTTREIVEL 164
            +A   L   +L+F   + ++++    GSCNGLV    H+   ++   + NP+TRE  EL
Sbjct: 79  FDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVCGLIHDNPLIY---IWNPSTRESREL 135

Query: 163 KESCYEVINNWSEIEIMYGFGYDSLSDDYKVVSVS 59
                  I   SE +  YGFGYD   DDYK+V VS
Sbjct: 136 ------AIPGSSEDDAFYGFGYDVKLDDYKIVRVS 164


>ref|XP_003623407.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355498422|gb|AES79625.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 373

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 55/151 (36%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
 Frame = -2

Query: 493 RLPAKSLGRFRCVSKDWLSLISEPQFIKTH-QNAHNRNHLIFVXXXXXXXXXXXXXHEAV 317
           RLP KSL RF+C+SK + SLIS P F+K H Q +    +L+F                  
Sbjct: 18  RLPLKSLLRFQCLSKSFESLISNPTFVKYHVQRSQKNTNLLFKFHDYYRSFSMVNDKSLS 77

Query: 316 LTPNKLRFESH-HLDFTFYGSCNGLVLLSAHEF---DGVHTLVVLNPTTREIVELKESCY 149
                  F S     +   GSCNGLV L A +F      + + + NP+T+ +   K S  
Sbjct: 78  TIVEDFDFGSRLKSKYKVVGSCNGLVCLIAEDFFKHRAKYLVCLWNPSTKSL-SYKPSLL 136

Query: 148 EVINNWSEIEIMYGFGYDSLSDDYKVVSVSY 56
               +W     M+GFGYDSLSD YKVV ++Y
Sbjct: 137 VHSRSWGPSCSMFGFGYDSLSDTYKVVVLNY 167


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
 Frame = -2

Query: 493 RLPAKSLGRFRCVSKDWLSLISEPQFIKTH----QNAHNRNHLIFVXXXXXXXXXXXXXH 326
           RLP KSL RFRCVSK W   I  P FI TH      AH   +LI                
Sbjct: 14  RLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLCTVDLDSPD 73

Query: 325 EAVLTPNKLRFESHHLDFTFYGSCNGLVLLSAHEFDGVHTLVVLNPTTREIVELKESCYE 146
              +       +S        GSCNGL+ L   +F    ++ + NP+TRE   +  S  E
Sbjct: 74  FTSIELKNNPLKSDDCATEVMGSCNGLLALLNSDF----SIALYNPSTREKKMIPVSPLE 129

Query: 145 VINNWSEIEI-----MYGFGYDSLSDDYKVVSVSYFHNNYLIPPDSM---SVHVYS 2
           + N+  + ++      YGFG+D +++DYKVV   +F+ +    PD      V VYS
Sbjct: 130 LPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGD---SPDGFFHCEVKVYS 182


>ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]
          Length = 408

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 57/149 (38%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
 Frame = -2

Query: 493 RLPAKSLGRFRCVSKDWLSLISEPQFIKTHQNAHNRNHLIFVXXXXXXXXXXXXXHEAVL 314
           RLP KSL RFRCV K W +LIS+PQF K H     R H I                 +V 
Sbjct: 15  RLPVKSLLRFRCVCKAWCTLISQPQFTKAHL-CRQRTHPITQILVPPSVDSQPNDGFSVD 73

Query: 313 TPNKLRFESHHLDFTFYGSCNGLVLL-----SAHEFDGVHTLVVLNPTTREIVELKESCY 149
               L   S         SC+GL+ L       H     H LV+ NP+TR+   L    +
Sbjct: 74  LDFPLGLSSSKGSTAILDSCHGLLCLVDGFYGFHIHQPPHELVLWNPSTRQSNHLP---F 130

Query: 148 EVINNWSEIEIMYGFGYDSLSDDYKVVSV 62
               N+S    +YGFGYDS SDDYK+V V
Sbjct: 131 PSFVNYS--SCLYGFGYDSYSDDYKIVRV 157


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
 Frame = -2

Query: 493 RLPAKSLGRFRCVSKDWLSLISEPQFIKTHQNAHNRNHLIFVXXXXXXXXXXXXXHEAVL 314
           RLP K L + RC  K W SLIS P+F K H +   R H++                +++ 
Sbjct: 63  RLPVKLLLQLRCACKSWSSLISNPKFAKKHLSMSTR-HVLHCISSSGGDILKSYPLDSIY 121

Query: 313 TP------NKLRFESHHLDFTFYGSCNGLVLLSAHEFDGVHTLVVL----NPTTREIVEL 164
           T        +L +  H     F GSCNG++ L+A   +G HT +V     NP  R+  EL
Sbjct: 122 TNATTTAIPQLEYSVHRCSNYFIGSCNGILCLAA---EGYHTNLVTFRLWNPFIRKFKEL 178

Query: 163 KESCYEVINNWSEIEIMYGFGYDSLSDDYKVVSVSY---FHNNYLIPPDSMSVH 11
                +  + +  I  MYGFGYD +SD+YKVV+V     + ++ L+  D + V+
Sbjct: 179 PPLGDQQTSAY--IIKMYGFGYDPVSDNYKVVTVLRVFDYSSHILVKSDEVKVY 230


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