BLASTX nr result

ID: Atractylodes21_contig00012280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012280
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Viti...   381   e-128
ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|...   374   e-125
ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|2...   350   e-116
ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycin...   360   e-115
ref|XP_002300702.1| predicted protein [Populus trichocarpa] gi|2...   345   e-115

>ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera]
           gi|302142670|emb|CBI19873.3| unnamed protein product
           [Vitis vinifera]
          Length = 375

 Score =  381 bits (979), Expect(2) = e-128
 Identities = 187/262 (71%), Positives = 215/262 (82%)
 Frame = -2

Query: 788 KNSLSDWNCKDPTXXXXXXXXXXXLYMAYQKKRVGEVDDERLKFEINTMYSREGIEMYMS 609
           KNSLSDWN KDP+           LY++YQKKR+GEVDD+RLKFEI+T+ SREGIEMYMS
Sbjct: 96  KNSLSDWNSKDPSGLLTLIHELRDLYLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMS 155

Query: 608 SGADKPEEVKFAVPLLEMDLNKMVSGSTWRHQQKIYLQVIYPVSRKYLAMASAPRLKLVS 429
           SG +KPEEVKF+VPLL+MD+NKMV G  WRHQQKIYLQVI+PV RKY++  SAPRLKLVS
Sbjct: 156 SGVEKPEEVKFSVPLLDMDINKMVFGCNWRHQQKIYLQVIFPVGRKYVSAPSAPRLKLVS 215

Query: 428 SPELKALFSIDEFRLPPWLEGMCMAEYLPTLEEMLESQIRDAVSSIEVRRKFITALAIPF 249
           SPELK LF I++ +LPPWL+GMCMAEYLP LEE LE QI DAVS I+VRR FI ALA  F
Sbjct: 216 SPELKVLFPIEDVKLPPWLDGMCMAEYLPNLEETLERQILDAVSLIDVRRHFIEALAPVF 275

Query: 248 GRPLESDPVFCRKATFLACSGVFTFLVHISLPLQFPRQQPALMLQSSQHFHSHPGNAPVK 69
           GRPLE+DPVFCRK TFLA SGVFT LVH  LP QFP+QQP LMLQSSQHF+S    AP+K
Sbjct: 276 GRPLEADPVFCRKVTFLAASGVFTCLVHFFLPTQFPKQQPVLMLQSSQHFNSQ--GAPIK 333

Query: 68  SAILQDYPWSPRWDVAEMTERI 3
           S +L +YPWSPRW+ ++M ERI
Sbjct: 334 SHLLTEYPWSPRWESSQMAERI 355



 Score =  106 bits (265), Expect(2) = e-128
 Identities = 46/69 (66%), Positives = 56/69 (81%)
 Frame = -1

Query: 1092 MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKNPALLDRFTLAIPFCLDYIKWDVIY 913
            M  D+ PP++  Q+NYLL+HSP SIK++QMW+G K   LLDRF+L IPFCLD+IKWDVIY
Sbjct: 1    MTTDAFPPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIY 60

Query: 912  NAQFPLLAP 886
            NAQ PL AP
Sbjct: 61   NAQCPLAAP 69


>ref|XP_002510541.1| Protein BRE, putative [Ricinus communis]
           gi|223551242|gb|EEF52728.1| Protein BRE, putative
           [Ricinus communis]
          Length = 362

 Score =  374 bits (961), Expect(2) = e-125
 Identities = 181/261 (69%), Positives = 217/261 (83%)
 Frame = -2

Query: 785 NSLSDWNCKDPTXXXXXXXXXXXLYMAYQKKRVGEVDDERLKFEINTMYSREGIEMYMSS 606
           NSL+DWN KDPT            YM+YQKKRVGEVDD+RLKFEI+T+ SREGIEM+MSS
Sbjct: 99  NSLTDWNNKDPTRLLALIEELRDNYMSYQKKRVGEVDDDRLKFEISTILSREGIEMHMSS 158

Query: 605 GADKPEEVKFAVPLLEMDLNKMVSGSTWRHQQKIYLQVIYPVSRKYLAMASAPRLKLVSS 426
           G +KPEEVKFAVPL++M++NKMV    WRH QKIYLQVIYPV RKY++  SAPRLKL+S+
Sbjct: 159 GFEKPEEVKFAVPLMDMNINKMVFACPWRHPQKIYLQVIYPVGRKYVSAPSAPRLKLMST 218

Query: 425 PELKALFSIDEFRLPPWLEGMCMAEYLPTLEEMLESQIRDAVSSIEVRRKFITALAIPFG 246
            ELKALFSID+ +LPPWL+GMCMAEYLP LEE+L+ Q+ +AVS I+VRR FI ALA  FG
Sbjct: 219 TELKALFSIDDVKLPPWLDGMCMAEYLPNLEELLQRQVSEAVSLIDVRRCFIEALAPLFG 278

Query: 245 RPLESDPVFCRKATFLACSGVFTFLVHISLPLQFPRQQPALMLQSSQHFHSHPGNAPVKS 66
           RPLE+DPVFCRKATFLA SG FTFLVH+ L  QFP+QQP+LMLQS+QHF++H    PVKS
Sbjct: 279 RPLEADPVFCRKATFLAASGPFTFLVHLYLSTQFPKQQPSLMLQSTQHFNTH--GTPVKS 336

Query: 65  AILQDYPWSPRWDVAEMTERI 3
           ++L DYPWSPRW++++M ERI
Sbjct: 337 SLLADYPWSPRWEISQMAERI 357



 Score =  101 bits (251), Expect(2) = e-125
 Identities = 45/70 (64%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = -1

Query: 1092 MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKN-PALLDRFTLAIPFCLDYIKWDVI 916
            M+ D  PP +  QL YLL H  H+IKVEQ+WSGSK  P  LDRFTL IP+CLDY+KWD+I
Sbjct: 1    MSFDGFPPFISAQLQYLLNHYTHAIKVEQVWSGSKYYPGSLDRFTLLIPYCLDYLKWDII 60

Query: 915  YNAQFPLLAP 886
            YN +FPL AP
Sbjct: 61   YNVEFPLAAP 70


>ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|222857177|gb|EEE94724.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  350 bits (899), Expect(2) = e-116
 Identities = 168/262 (64%), Positives = 207/262 (79%)
 Frame = -2

Query: 788 KNSLSDWNCKDPTXXXXXXXXXXXLYMAYQKKRVGEVDDERLKFEINTMYSREGIEMYMS 609
           KNSL+DWN KDPT            Y +YQ+KRVGEVDD+RLKFEI+T+ SREGIEM+MS
Sbjct: 98  KNSLTDWNNKDPTRLLALVIELRDKYRSYQEKRVGEVDDDRLKFEISTIVSREGIEMHMS 157

Query: 608 SGADKPEEVKFAVPLLEMDLNKMVSGSTWRHQQKIYLQVIYPVSRKYLAMASAPRLKLVS 429
           SG +KPEEVKFAVPL+ M++NKMV    WRH QKIYLQVIYPV RKY    SAPRLKL+ 
Sbjct: 158 SGVEKPEEVKFAVPLMNMNINKMVPACPWRHPQKIYLQVIYPVGRKYAPSPSAPRLKLMC 217

Query: 428 SPELKALFSIDEFRLPPWLEGMCMAEYLPTLEEMLESQIRDAVSSIEVRRKFITALAIPF 249
           +PELKALFSID+ +LP WL+GMCMAEYLP LEE+L+ Q+ +AV+ I+VRR+FI ALA   
Sbjct: 218 TPELKALFSIDDVKLPSWLDGMCMAEYLPHLEELLQRQVLEAVTLIDVRRQFIEALAPLL 277

Query: 248 GRPLESDPVFCRKATFLACSGVFTFLVHISLPLQFPRQQPALMLQSSQHFHSHPGNAPVK 69
           GRPLE+DPVFCRKA+FL CSG FT ++H+ L   FP+QQP+LM QS+QHF+S     PVK
Sbjct: 278 GRPLEADPVFCRKASFLVCSGPFTIMLHVFLSTNFPKQQPSLMFQSTQHFNSL--GMPVK 335

Query: 68  SAILQDYPWSPRWDVAEMTERI 3
           S ++ +YPWSPRW+ ++M +RI
Sbjct: 336 SPLITEYPWSPRWETSQMADRI 357



 Score = 95.5 bits (236), Expect(2) = e-116
 Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = -1

Query: 1092 MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKN-PALLDRFTLAIPFCLDYIKWDVI 916
            M+ D  PP +  QL YLL H PH+I++EQ  SG++  P  LDRFTL IP+CLDY+KWDVI
Sbjct: 1    MSYDGFPPFISAQLQYLLNHYPHTIQIEQARSGTRYFPGSLDRFTLLIPYCLDYMKWDVI 60

Query: 915  YNAQFPLLAP 886
            YNA+FPL AP
Sbjct: 61   YNAEFPLAAP 70


>ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycine max]
           gi|255644684|gb|ACU22844.1| unknown [Glycine max]
          Length = 378

 Score =  360 bits (925), Expect(2) = e-115
 Identities = 174/261 (66%), Positives = 212/261 (81%)
 Frame = -2

Query: 785 NSLSDWNCKDPTXXXXXXXXXXXLYMAYQKKRVGEVDDERLKFEINTMYSREGIEMYMSS 606
           N LSDWN KDPT            Y+ YQ+KRVGEVDD+RL FEI+T+ SREGIEM+MSS
Sbjct: 99  NCLSDWNYKDPTRLLTLIQYLRDQYVLYQRKRVGEVDDDRLTFEISTILSREGIEMHMSS 158

Query: 605 GADKPEEVKFAVPLLEMDLNKMVSGSTWRHQQKIYLQVIYPVSRKYLAMASAPRLKLVSS 426
           GA+K EEVKFAVPLL+M++NKMV+   WR+ Q+IYLQV+YPV RKY+++ SAPRLKLVSS
Sbjct: 159 GAEKSEEVKFAVPLLDMNINKMVACCPWRYSQRIYLQVVYPVGRKYMSVPSAPRLKLVSS 218

Query: 425 PELKALFSIDEFRLPPWLEGMCMAEYLPTLEEMLESQIRDAVSSIEVRRKFITALAIPFG 246
           PELKA+FSID+ +LPPWL+GMC+AEYLP LEE L  Q+ +AVS IEVRR FI AL+ P G
Sbjct: 219 PELKAVFSIDDVKLPPWLDGMCLAEYLPNLEEYLGKQVLEAVSLIEVRRHFIEALSSPLG 278

Query: 245 RPLESDPVFCRKATFLACSGVFTFLVHISLPLQFPRQQPALMLQSSQHFHSHPGNAPVKS 66
           RP+E+D VFCRKATFLA SGVF+FLVH+ +P QFP+QQPA+MLQSSQH +S    AP+KS
Sbjct: 279 RPVEADAVFCRKATFLAASGVFSFLVHLLIPTQFPKQQPAIMLQSSQHLNSQ--MAPMKS 336

Query: 65  AILQDYPWSPRWDVAEMTERI 3
            ++ DYPWSPRW+ + M ERI
Sbjct: 337 RVMSDYPWSPRWEPSMMAERI 357



 Score = 84.0 bits (206), Expect(2) = e-115
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = -1

Query: 1083 DSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSK-NPALLDRFTLAIPFCLDYIKWDVIYNA 907
            +++PP +  QL++LL+H   ++KVEQMWS  K N   LDRFTL IP+CLD+IKWDVIY+A
Sbjct: 7    ENVPPFIAAQLSHLLSHFGLTVKVEQMWSSDKYNSTPLDRFTLLIPYCLDFIKWDVIYDA 66

Query: 906  QFPLLAP 886
            + P  AP
Sbjct: 67   ESPNTAP 73


>ref|XP_002300702.1| predicted protein [Populus trichocarpa] gi|222842428|gb|EEE79975.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  345 bits (885), Expect(2) = e-115
 Identities = 168/262 (64%), Positives = 206/262 (78%)
 Frame = -2

Query: 788 KNSLSDWNCKDPTXXXXXXXXXXXLYMAYQKKRVGEVDDERLKFEINTMYSREGIEMYMS 609
           KNSL+DWN KDP+            Y +YQ++RVGEVDD+RLKFEI+T+ SREGIEM+MS
Sbjct: 98  KNSLTDWNNKDPSRLLALVMELRDKYRSYQERRVGEVDDDRLKFEISTIVSREGIEMHMS 157

Query: 608 SGADKPEEVKFAVPLLEMDLNKMVSGSTWRHQQKIYLQVIYPVSRKYLAMASAPRLKLVS 429
           SG +KP EVKFAVPL++M++NKMV G  W H QKIYLQVIYPV RKY    SAPRLKL+ 
Sbjct: 158 SGVEKPGEVKFAVPLMDMNINKMVLGCPWSHPQKIYLQVIYPVGRKYAPATSAPRLKLMC 217

Query: 428 SPELKALFSIDEFRLPPWLEGMCMAEYLPTLEEMLESQIRDAVSSIEVRRKFITALAIPF 249
           +PELKALFSIDE +LP WL+GMCMAEYLP LEE+L+ Q+ +AV+ I+VRR+FI AL+   
Sbjct: 218 TPELKALFSIDEVKLPAWLDGMCMAEYLPHLEELLQRQVLEAVTLIDVRRQFIEALSPVI 277

Query: 248 GRPLESDPVFCRKATFLACSGVFTFLVHISLPLQFPRQQPALMLQSSQHFHSHPGNAPVK 69
           GRPLE+DPVFCRKA+FL CSG FTFLVH  L  QFP+Q+P+LM QS QHF+S     PVK
Sbjct: 278 GRPLEADPVFCRKASFLVCSGPFTFLVHFFLSTQFPKQRPSLMFQSIQHFNSL--GIPVK 335

Query: 68  SAILQDYPWSPRWDVAEMTERI 3
           S ++ +Y WSPRW+ ++M ERI
Sbjct: 336 SPLITEYLWSPRWEPSQMAERI 357



 Score = 99.0 bits (245), Expect(2) = e-115
 Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = -1

Query: 1092 MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKN-PALLDRFTLAIPFCLDYIKWDVI 916
            M  D   P++ +QL YLL H PH+I++EQ WSG++  P  LDRFTL IP+CLDYIKWD+I
Sbjct: 1    MPFDGFSPLISSQLQYLLNHFPHTIQIEQAWSGTRYFPGSLDRFTLLIPYCLDYIKWDII 60

Query: 915  YNAQFPLLAP 886
            YNA+FPL AP
Sbjct: 61   YNAEFPLAAP 70


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