BLASTX nr result

ID: Atractylodes21_contig00012274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012274
         (2584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   424   e-116
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...   424   e-116
gb|ABK92556.1| unknown [Populus trichocarpa]                          419   e-114
ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicag...   401   e-109
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   396   e-107

>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
            vinifera]
          Length = 545

 Score =  424 bits (1089), Expect = e-116
 Identities = 220/318 (69%), Positives = 247/318 (77%)
 Frame = -2

Query: 1206 ICVANQADLLFTYGYEKNLKDLKAHIPIRCQCLLMSATSSDDVESLKKLYLHNPYILTLP 1027
            I V ++ADLL +YGYE +LK L AH+P RCQCLLMSATSS DVE LKKL LHNP+ILTLP
Sbjct: 123  ILVLDEADLLLSYGYEDDLKALTAHVPRRCQCLLMSATSSADVEKLKKLILHNPFILTLP 182

Query: 1026 EVGDAKDEIVPKNVQQFWIQCSDRDKXXXXXXXXXXXXXXXXXLIFTNTIDTSFRLKLFL 847
            EVGD KDEI+PKNVQQFWI CS RDK                 LIFTN+ID +FRLKLFL
Sbjct: 183  EVGDGKDEIIPKNVQQFWISCSARDKLLYILALLKLELVQKKILIFTNSIDMAFRLKLFL 242

Query: 846  EQFGIKSAVLNAELPVNSRLHILEGFNAGLFDYLIATDDSDSKEKEQTDGDXXXXXXXXX 667
            E+FGIKSAVLNAELP NSRLHILE FNAGLFDYLIATD S  KEKEQ D           
Sbjct: 243  EKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSR 302

Query: 666  XXXXXKLDSEFGVVRGIDFKNVHTVINFDMPASTAGYVHRIGRTGRAYNTGQSISIVSPE 487
                 KLDSEFGVVRGIDFKNVHTVINF+MP +  GYVHRIGRTGRAYNTG S+S+VSP+
Sbjct: 303  KHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPD 362

Query: 486  EMEIFEEIKVFLGENEDNDFKCIAPFPLLEKNAVEFLRYRAEDVARSVTKIAVKEARAQD 307
            EMEI EEIK  LG++E+ +   IAPFPLL KNAVE LRYRAEDV++SVTK+AV+E+RAQD
Sbjct: 363  EMEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQD 422

Query: 306  LRNEILNSDKFFYFFSLN 253
            LRNEI+NS+K    F +N
Sbjct: 423  LRNEIVNSEKLKAHFEVN 440


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 616

 Score =  424 bits (1089), Expect = e-116
 Identities = 219/318 (68%), Positives = 247/318 (77%)
 Frame = -2

Query: 1206 ICVANQADLLFTYGYEKNLKDLKAHIPIRCQCLLMSATSSDDVESLKKLYLHNPYILTLP 1027
            I V ++ADLL ++GYE +L+ L A IP RCQCLLMSATSSDDV+ LKKL LHNPYILTLP
Sbjct: 194  ILVLDEADLLLSFGYEDDLRALTALIPRRCQCLLMSATSSDDVDKLKKLMLHNPYILTLP 253

Query: 1026 EVGDAKDEIVPKNVQQFWIQCSDRDKXXXXXXXXXXXXXXXXXLIFTNTIDTSFRLKLFL 847
            EV   KDE +PKNVQQFWI CS RDK                 LIFTN+ID SFRL+LFL
Sbjct: 254  EVEGNKDEAIPKNVQQFWISCSGRDKLVHILALLKLDLVQKKVLIFTNSIDMSFRLRLFL 313

Query: 846  EQFGIKSAVLNAELPVNSRLHILEGFNAGLFDYLIATDDSDSKEKEQTDGDXXXXXXXXX 667
            E+FGIKSA+LNAELP NSRLHILE FNAGLFDYLIATDDS++KEKEQ   D         
Sbjct: 314  EKFGIKSAILNAELPQNSRLHILEEFNAGLFDYLIATDDSETKEKEQEQADRNLAQSRKS 373

Query: 666  XXXXXKLDSEFGVVRGIDFKNVHTVINFDMPASTAGYVHRIGRTGRAYNTGQSISIVSPE 487
                 KLDSEFGVVRGIDFKNVHTV+N+DMP + AGYVHRIGRTGR YN+G S+S+VSP+
Sbjct: 374  KKSKQKLDSEFGVVRGIDFKNVHTVVNYDMPLNAAGYVHRIGRTGRGYNSGSSVSLVSPD 433

Query: 486  EMEIFEEIKVFLGENEDNDFKCIAPFPLLEKNAVEFLRYRAEDVARSVTKIAVKEARAQD 307
            EMEI E++K FLG++E+ D   IAPFPLL KNAVE LRYRAEDVA+SVTKIAVKEARAQD
Sbjct: 434  EMEILEDVKSFLGDDENKDSNIIAPFPLLTKNAVESLRYRAEDVAKSVTKIAVKEARAQD 493

Query: 306  LRNEILNSDKFFYFFSLN 253
            LRNEILNS+K    F  N
Sbjct: 494  LRNEILNSEKLKAHFEAN 511


>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score =  419 bits (1077), Expect = e-114
 Identities = 215/318 (67%), Positives = 247/318 (77%)
 Frame = -2

Query: 1206 ICVANQADLLFTYGYEKNLKDLKAHIPIRCQCLLMSATSSDDVESLKKLYLHNPYILTLP 1027
            I V ++ADLL ++GYE++LK L A +P RCQCLLMSATSS DV+ LKKL LHNPY+LTLP
Sbjct: 197  ILVLDEADLLLSFGYEEDLKALTALVPRRCQCLLMSATSSADVDKLKKLVLHNPYVLTLP 256

Query: 1026 EVGDAKDEIVPKNVQQFWIQCSDRDKXXXXXXXXXXXXXXXXXLIFTNTIDTSFRLKLFL 847
            EV   KDE++PKNVQQFW+ C DRDK                 LIFTN ID SFRLKLFL
Sbjct: 257  EVEGVKDEVIPKNVQQFWVSCGDRDKLVHILALLKLDLVQKKVLIFTNAIDMSFRLKLFL 316

Query: 846  EQFGIKSAVLNAELPVNSRLHILEGFNAGLFDYLIATDDSDSKEKEQTDGDXXXXXXXXX 667
            E+FGIKSAVLNAELP NSRLHILE FNAGLFDYLIATDD ++KEKE+ +           
Sbjct: 317  EKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDRETKEKEKANEGSLAETRKSK 376

Query: 666  XXXXXKLDSEFGVVRGIDFKNVHTVINFDMPASTAGYVHRIGRTGRAYNTGQSISIVSPE 487
                 KLDSEFGVVRGIDFKNVHTVIN+DMP S  GYVHRIGRTGRAY+TG S+S+VSP+
Sbjct: 377  KHAKQKLDSEFGVVRGIDFKNVHTVINYDMPLSATGYVHRIGRTGRAYSTGSSVSLVSPD 436

Query: 486  EMEIFEEIKVFLGENEDNDFKCIAPFPLLEKNAVEFLRYRAEDVARSVTKIAVKEARAQD 307
            EMEI EEIK FLG++E+N+   I+P+PLL KNAVE LRYRAED A+SVTKIAV+EARAQD
Sbjct: 437  EMEILEEIKSFLGDDENNESNVISPYPLLTKNAVESLRYRAEDTAKSVTKIAVREARAQD 496

Query: 306  LRNEILNSDKFFYFFSLN 253
            LRNEILNS+K    F +N
Sbjct: 497  LRNEILNSEKLKAHFEVN 514


>ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355480177|gb|AES61380.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 604

 Score =  401 bits (1031), Expect = e-109
 Identities = 210/316 (66%), Positives = 239/316 (75%)
 Frame = -2

Query: 1200 VANQADLLFTYGYEKNLKDLKAHIPIRCQCLLMSATSSDDVESLKKLYLHNPYILTLPEV 1021
            V ++ADLL +YGYE ++K L  HIP  CQCLLMSATSSDDV+ LKKL LHNP ILTLPEV
Sbjct: 183  VLDEADLLLSYGYENDIKALTPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEV 242

Query: 1020 GDAKDEIVPKNVQQFWIQCSDRDKXXXXXXXXXXXXXXXXXLIFTNTIDTSFRLKLFLEQ 841
            G+ KDE++PKNVQQFWI C   DK                 LIFTN IDTSFRLKLFLE+
Sbjct: 243  GNRKDEVIPKNVQQFWIYCPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEK 302

Query: 840  FGIKSAVLNAELPVNSRLHILEGFNAGLFDYLIATDDSDSKEKEQTDGDXXXXXXXXXXX 661
            FGIKSAVLNAELP NSRLHILE FNAGLFDYLIATD S S EK++   +           
Sbjct: 303  FGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSRKY 362

Query: 660  XXXKLDSEFGVVRGIDFKNVHTVINFDMPASTAGYVHRIGRTGRAYNTGQSISIVSPEEM 481
               KLDSEFGVVRGIDFKNV+TVINF+MP S  GYVHRIGRTGRAY++G SIS+VS +EM
Sbjct: 363  TKLKLDSEFGVVRGIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVSTDEM 422

Query: 480  EIFEEIKVFLGENEDNDFKCIAPFPLLEKNAVEFLRYRAEDVARSVTKIAVKEARAQDLR 301
            + FEE++ F+G+NE+N    IA FPLL K+AVE LRYRAEDVA+SVTKIAV+E+RAQDLR
Sbjct: 423  DTFEEVRSFVGDNENNGSNSIAEFPLLTKSAVESLRYRAEDVAKSVTKIAVRESRAQDLR 482

Query: 300  NEILNSDKFFYFFSLN 253
            NEILNS K    F  N
Sbjct: 483  NEILNSAKLTAHFQTN 498


>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine max]
          Length = 601

 Score =  396 bits (1018), Expect = e-107
 Identities = 206/316 (65%), Positives = 239/316 (75%)
 Frame = -2

Query: 1200 VANQADLLFTYGYEKNLKDLKAHIPIRCQCLLMSATSSDDVESLKKLYLHNPYILTLPEV 1021
            V ++ADLL +YGYE ++K L  H+P  CQCLLMSATSS DV+ LKKL LHNP+ILTLPEV
Sbjct: 180  VLDEADLLLSYGYENDIKALTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPEV 239

Query: 1020 GDAKDEIVPKNVQQFWIQCSDRDKXXXXXXXXXXXXXXXXXLIFTNTIDTSFRLKLFLEQ 841
            G+ KDE++PKNVQQFWI C   DK                 LIFTNTID SFRLKLFLE+
Sbjct: 240  GNHKDEVIPKNVQQFWISCPASDKLLYILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEK 299

Query: 840  FGIKSAVLNAELPVNSRLHILEGFNAGLFDYLIATDDSDSKEKEQTDGDXXXXXXXXXXX 661
            FGI+SAVLN ELP NSRLHILE FNAGLFDYLIATD S SKEK++   +           
Sbjct: 300  FGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDEVPKESIVGSRKSRKH 359

Query: 660  XXXKLDSEFGVVRGIDFKNVHTVINFDMPASTAGYVHRIGRTGRAYNTGQSISIVSPEEM 481
               KLDSEFGVVRGIDFKNV+TVINF+MP S AGYVHRIGRTGRAYN+G S+S+VS +EM
Sbjct: 360  AKIKLDSEFGVVRGIDFKNVYTVINFEMPQSVAGYVHRIGRTGRAYNSGASVSLVSTDEM 419

Query: 480  EIFEEIKVFLGENEDNDFKCIAPFPLLEKNAVEFLRYRAEDVARSVTKIAVKEARAQDLR 301
            +  EEI+ F+G++E+     IA FPLL KNAVE LRYRAEDVA+SVT+IAV+E+RAQDLR
Sbjct: 420  DTLEEIRSFVGDDENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLR 479

Query: 300  NEILNSDKFFYFFSLN 253
            NEILNS+K    F  N
Sbjct: 480  NEILNSEKLKTHFETN 495


Top