BLASTX nr result

ID: Atractylodes21_contig00012268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012268
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22319.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002263468.1| PREDICTED: uncharacterized protein LOC100263...   129   2e-28
ref|XP_002319114.1| predicted protein [Populus trichocarpa] gi|2...   121   6e-26
gb|AFK13836.1| putative pre-mRNA processing protein PRP39 [Beta ...   120   1e-25
ref|XP_003556481.1| PREDICTED: uncharacterized protein LOC100814...   119   4e-25

>emb|CBI22319.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/110 (57%), Positives = 78/110 (70%)
 Frame = +2

Query: 209 MFGVECCCSDRDHXXXXXXXXXXXXFSLPSPLPQWPQGQGFATGRISLGELEVAMVKDFE 388
           MFG EC C +RD             FSLP+P+P+WP+GQGFATG+I+LGE+ V  +  FE
Sbjct: 1   MFGCECFCWNRDSQYRPLEPQP---FSLPAPIPEWPRGQGFATGQINLGEIVVLKITQFE 57

Query: 389 CISSYAPKKGKTSGVTFYKPVEIPDGFYSFGHYCQLSDQPLRGFVVVARD 538
            I S     GKT+GVTFYKPV IPDGF+S GHYCQ +DQ LRG+V+VA+D
Sbjct: 58  RIWSCNQLHGKTTGVTFYKPVGIPDGFFSLGHYCQPNDQALRGYVLVAQD 107


>ref|XP_002263468.1| PREDICTED: uncharacterized protein LOC100263054 [Vitis vinifera]
           gi|147791031|emb|CAN61465.1| hypothetical protein
           VITISV_005001 [Vitis vinifera]
          Length = 568

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/110 (57%), Positives = 78/110 (70%)
 Frame = +2

Query: 209 MFGVECCCSDRDHXXXXXXXXXXXXFSLPSPLPQWPQGQGFATGRISLGELEVAMVKDFE 388
           MFG EC C +RD             FSLP+P+P+WP+GQGFATG+I+LGE+ V  +  FE
Sbjct: 1   MFGCECFCWNRDSQYRPLEPQP---FSLPAPIPEWPRGQGFATGQINLGEIVVLKITQFE 57

Query: 389 CISSYAPKKGKTSGVTFYKPVEIPDGFYSFGHYCQLSDQPLRGFVVVARD 538
            I S     GKT+GVTFYKPV IPDGF+S GHYCQ +DQ LRG+V+VA+D
Sbjct: 58  RIWSCNQLHGKTTGVTFYKPVGIPDGFFSLGHYCQPNDQALRGYVLVAQD 107


>ref|XP_002319114.1| predicted protein [Populus trichocarpa] gi|222857490|gb|EEE95037.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  121 bits (304), Expect = 6e-26
 Identities = 59/113 (52%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
 Frame = +2

Query: 209 MFGVEC---CCSDRDHXXXXXXXXXXXXFSLPSPLPQWPQGQGFATGRISLGELEVAMVK 379
           MFG  C   C S++D             FSLP+PLP WPQGQGFA GRI+LGE+EVA + 
Sbjct: 1   MFGGYCECFCWSNQDFYDDDFYLPDPQPFSLPAPLPIWPQGQGFAAGRINLGEIEVAKIT 60

Query: 380 DFECISSYAPKKGKTSGVTFYKPVEIPDGFYSFGHYCQLSDQPLRGFVVVARD 538
            FE + S    +GK+ GV+FY+PV IP+GF+  G+YCQ +DQPLRG+V+V  D
Sbjct: 61  KFESVWSCGLLRGKSKGVSFYRPVGIPEGFHCLGYYCQSNDQPLRGYVLVGCD 113


>gb|AFK13836.1| putative pre-mRNA processing protein PRP39 [Beta vulgaris subsp.
           vulgaris]
          Length = 578

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/85 (63%), Positives = 67/85 (78%)
 Frame = +2

Query: 284 FSLPSPLPQWPQGQGFATGRISLGELEVAMVKDFECISSYAPKKGKTSGVTFYKPVEIPD 463
           FSLP+ LPQWPQG+GFATG+I+LGELEVA +  FE + S  P +  + GVTFYKP  IPD
Sbjct: 57  FSLPAHLPQWPQGEGFATGKINLGELEVAKITKFESVWSCNPSRRNSKGVTFYKPFAIPD 116

Query: 464 GFYSFGHYCQLSDQPLRGFVVVARD 538
           GF+  GHYCQ +D+PL GFV+VAR+
Sbjct: 117 GFFCLGHYCQSNDRPLWGFVLVARE 141


>ref|XP_003556481.1| PREDICTED: uncharacterized protein LOC100814522 [Glycine max]
          Length = 559

 Score =  119 bits (297), Expect = 4e-25
 Identities = 59/110 (53%), Positives = 70/110 (63%)
 Frame = +2

Query: 209 MFGVECCCSDRDHXXXXXXXXXXXXFSLPSPLPQWPQGQGFATGRISLGELEVAMVKDFE 388
           MFG +  C D               FSLPSPLPQWPQG  FA GRI LGE+EV  V  FE
Sbjct: 1   MFGCKSLCWDS---VPEFTDPDPLPFSLPSPLPQWPQGGSFACGRICLGEIEVIKVNKFE 57

Query: 389 CISSYAPKKGKTSGVTFYKPVEIPDGFYSFGHYCQLSDQPLRGFVVVARD 538
            +       GK+ G TFY+P+EIP+GF+  GHYCQ +DQPLRG+V+VARD
Sbjct: 58  KVWRCTSLNGKSLGFTFYRPLEIPEGFFCLGHYCQSNDQPLRGYVLVARD 107


Top