BLASTX nr result

ID: Atractylodes21_contig00012249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012249
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    51   1e-12
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    49   6e-12
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    49   6e-11

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 50.8 bits (120), Expect(2) = 1e-12
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +1

Query: 1   VKLYFDIHGTPPHLRICLARLSMTGLAQHWFAIVKEIHNELIWDSSRRS 147
           V++YFD+  T   +R+ LARLSM G   HWF ++ E  +EL W+  +R+
Sbjct: 74  VEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRA 122



 Score = 47.0 bits (110), Expect(2) = 1e-12
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = +3

Query: 132 QLTSELLQRFSSLEIQNPYEQLSTIHQVGSILDYIDDFEYLLSLVPRLP 278
           +L   L+ R+    ++NP+E+LSTI Q GS+ ++++ FE L S V RLP
Sbjct: 118 KLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLP 166


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 49.3 bits (116), Expect(2) = 6e-12
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +1

Query: 4   KLYFDIHGTPPHLRICLARLSMTGLAQHWFAIVKEIHNELIWDSSRRS 147
           ++YFD+  T   +R+ LARLSM G   HWF ++ E  +EL W++ +R+
Sbjct: 92  EIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRA 139



 Score = 45.8 bits (107), Expect(2) = 6e-12
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +3

Query: 135 LTSELLQRFSSLEIQNPYEQLSTIHQVGSILDYIDDFEYLLSLVPRLP 278
           L   L+ R+    ++NP+E+LST+ Q GS+ ++++ FE L S V RLP
Sbjct: 136 LKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLP 183


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 48.5 bits (114), Expect(2) = 6e-11
 Identities = 20/49 (40%), Positives = 34/49 (69%)
 Frame = +3

Query: 132 QLTSELLQRFSSLEIQNPYEQLSTIHQVGSILDYIDDFEYLLSLVPRLP 278
           +L   L+ R+    ++NP+E+LST+ Q+GS+ ++++ FE L S V RLP
Sbjct: 808 KLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLP 856



 Score = 43.1 bits (100), Expect(2) = 6e-11
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = +1

Query: 4   KLYFDIHGTPPHLRICLARLSMTGLAQHWFAIVKEIHNEL 123
           ++YFD+  TP  +R+ L+RLSM G   HWF ++ E  ++L
Sbjct: 765 EIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDL 804


Top