BLASTX nr result

ID: Atractylodes21_contig00012232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012232
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]        63   2e-08
ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]    59   5e-07
ref|XP_004145646.1| PREDICTED: LOW QUALITY PROTEIN: transportin-...    59   5e-07
ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...    58   7e-07

>ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|222861841|gb|EEE99383.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/47 (65%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -2

Query: 296  ALADAAVDYVGSRTSDGEKN-HKHMRGKGGRVLKCLLREFVDSHRNI 159
            AL  AA DY+GS+T +GEKN + HM+GKGGRVLK ++REF DSHRN+
Sbjct: 958  ALVGAASDYLGSKTFNGEKNNYGHMQGKGGRVLKRIIREFADSHRNV 1004


>ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]
          Length = 1011

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/47 (70%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -2

Query: 296  ALADAAVDYVGSRTSDGEKNH-KHMRGKGGRVLKCLLREFVDSHRNI 159
            ALADAA DY+ S+ SDG K+   HM+GKGGRVLK L+REF DSHRNI
Sbjct: 961  ALADAASDYLESKNSDGLKSDFGHMQGKGGRVLKRLVREFADSHRNI 1007


>ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 1029

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -2

Query: 296  ALADAAVDYVGSRTSDGEK-NHKHMRGKGGRVLKCLLREFVDSHRNI 159
            AL DAA DY+ S++ D  K N+ HM+GKGGRVLK L+REF D HRN+
Sbjct: 966  ALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNL 1012


>ref|XP_004145646.1| PREDICTED: LOW QUALITY PROTEIN: transportin-3-like [Cucumis sativus]
          Length = 1031

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -2

Query: 296  ALADAAVDYVGSRTSDGEK-NHKHMRGKGGRVLKCLLREFVDSHRNI 159
            AL DAA DY+ S++ D  K N+ HM+GKGGRVLK L+REF D HRN+
Sbjct: 968  ALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNL 1014


>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
            gi|296082227|emb|CBI21232.3| unnamed protein product
            [Vitis vinifera]
          Length = 1015

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/47 (57%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -2

Query: 296  ALADAAVDYVGSRTSDGEKNHK-HMRGKGGRVLKCLLREFVDSHRNI 159
            AL  AA+DY+ S+  DG K+++ HM+GKGG++LK L+REF DSHRN+
Sbjct: 965  ALGGAALDYLESKRCDGGKDNRGHMQGKGGQILKRLVREFADSHRNV 1011


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