BLASTX nr result

ID: Atractylodes21_contig00012228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012228
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34418.3| unnamed protein product [Vitis vinifera]              231   1e-73
ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplasti...   231   4e-70
ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplasti...   229   2e-68
ref|XP_003611045.1| Transmembrane protein [Medicago truncatula] ...   214   4e-62
ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycin...   227   4e-61

>emb|CBI34418.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  231 bits (588), Expect(2) = 1e-73
 Identities = 129/210 (61%), Positives = 140/210 (66%)
 Frame = +3

Query: 573  AFLLIFFSELGDKTFFIXXXXXXXXXXXVVFLGTFGALGVMTIISVVLGRTFHYVDEILP 752
            AFLLIFFSELGDKTFFI           VVF+GTFGAL  MTIISVVLGRTFHYVDEILP
Sbjct: 184  AFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILP 243

Query: 753  FRFGEMXXXXXXXXXXXXXVYFGVSTLLDASSGDGLKXXXXXXXXXXXXXXVFGNGAGIL 932
            FRFGE              VYFGVSTLL+A+S +GLK                GNGAGIL
Sbjct: 244  FRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGIL 303

Query: 933  AAASTIISTFLLVFVAEWGDKSFFSTIALAAASSPXXXXXXXXXXXXXXXXXXXXXXXXX 1112
            ++AST+ISTFLLVFVAEWGDKSFFSTIALAAASSP                         
Sbjct: 304  SSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLL 363

Query: 1113 XTFLSEKVIAYVGGILFLVFAAVTVIEIVS 1202
             TFLSEKVIAY+GG+LFL+FAAVT+IEIVS
Sbjct: 364  GTFLSEKVIAYIGGVLFLIFAAVTLIEIVS 393



 Score = 73.6 bits (179), Expect(2) = 1e-73
 Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
 Frame = +2

Query: 242 DGNNATKLAHNVEDWECSTLDKS-----YRNKLTAKTSLPSKDISIDTLWNSYLKFMLFF 406
           +G  + +L HNV+D+  S  DKS     Y+ +     S+P  D S+  L    LKFML F
Sbjct: 91  NGKASKQLLHNVDDFGFS--DKSPAKINYKRENHTTRSIPVLDTSMGGL----LKFMLVF 144

Query: 407 GILTLQDAQSALAGSDVASLLQSSSFFGDLSDISTG 514
           G LTLQD+Q A+AGSD AS LQ +S+ GDL DISTG
Sbjct: 145 GFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTG 180


>ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplastic [Vitis vinifera]
          Length = 260

 Score =  231 bits (588), Expect(2) = 4e-70
 Identities = 129/210 (61%), Positives = 140/210 (66%)
 Frame = +3

Query: 573  AFLLIFFSELGDKTFFIXXXXXXXXXXXVVFLGTFGALGVMTIISVVLGRTFHYVDEILP 752
            AFLLIFFSELGDKTFFI           VVF+GTFGAL  MTIISVVLGRTFHYVDEILP
Sbjct: 51   AFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILP 110

Query: 753  FRFGEMXXXXXXXXXXXXXVYFGVSTLLDASSGDGLKXXXXXXXXXXXXXXVFGNGAGIL 932
            FRFGE              VYFGVSTLL+A+S +GLK                GNGAGIL
Sbjct: 111  FRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGIL 170

Query: 933  AAASTIISTFLLVFVAEWGDKSFFSTIALAAASSPXXXXXXXXXXXXXXXXXXXXXXXXX 1112
            ++AST+ISTFLLVFVAEWGDKSFFSTIALAAASSP                         
Sbjct: 171  SSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLL 230

Query: 1113 XTFLSEKVIAYVGGILFLVFAAVTVIEIVS 1202
             TFLSEKVIAY+GG+LFL+FAAVT+IEIVS
Sbjct: 231  GTFLSEKVIAYIGGVLFLIFAAVTLIEIVS 260



 Score = 62.0 bits (149), Expect(2) = 4e-70
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = +2

Query: 386 LKFMLFFGILTLQDAQSALAGSDVASLLQSSSFFGDLSDISTG 514
           LKFML FG LTLQD+Q A+AGSD AS LQ +S+ GDL DISTG
Sbjct: 5   LKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTG 47


>ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial [Cucumis
            sativus]
          Length = 342

 Score =  229 bits (584), Expect(2) = 2e-68
 Identities = 128/210 (60%), Positives = 137/210 (65%)
 Frame = +3

Query: 573  AFLLIFFSELGDKTFFIXXXXXXXXXXXVVFLGTFGALGVMTIISVVLGRTFHYVDEILP 752
            AFLLIFFSELGDKTFFI            VF GTFGALG MTIISVVLGRTFHYVDEILP
Sbjct: 133  AFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILP 192

Query: 753  FRFGEMXXXXXXXXXXXXXVYFGVSTLLDASSGDGLKXXXXXXXXXXXXXXVFGNGAGIL 932
            FR G+              VYFGV+TLLDASS DGLK                GNGAGIL
Sbjct: 193  FRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGIL 252

Query: 933  AAASTIISTFLLVFVAEWGDKSFFSTIALAAASSPXXXXXXXXXXXXXXXXXXXXXXXXX 1112
            AAAST++STF LVFVAEWGDKSFFSTIALAAASSP                         
Sbjct: 253  AAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLL 312

Query: 1113 XTFLSEKVIAYVGGILFLVFAAVTVIEIVS 1202
             TFLSEK+IAYVGG+LFLVFAAVT++EIV+
Sbjct: 313  GTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 342



 Score = 58.2 bits (139), Expect(2) = 2e-68
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +2

Query: 377 NSYLKFMLFFGILTLQDAQSALAGSDVASLLQSSSFFGDLSDISTG 514
           +S+LKFML  G   LQD+Q ALAGSDVA+ LQS    GDL DISTG
Sbjct: 84  SSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTG 129


>ref|XP_003611045.1| Transmembrane protein [Medicago truncatula]
            gi|355512380|gb|AES94003.1| Transmembrane protein
            [Medicago truncatula]
          Length = 403

 Score =  214 bits (544), Expect(2) = 4e-62
 Identities = 123/209 (58%), Positives = 131/209 (62%)
 Frame = +3

Query: 573  AFLLIFFSELGDKTFFIXXXXXXXXXXXVVFLGTFGALGVMTIISVVLGRTFHYVDEILP 752
            AFLLIFFSELGDKTFFI           VVF+GTFGAL  MT+ISV LGRTFHYVDE+LP
Sbjct: 196  AFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALGRTFHYVDELLP 255

Query: 753  FRFGEMXXXXXXXXXXXXXVYFGVSTLLDASSGDGLKXXXXXXXXXXXXXXVFGNGAGIL 932
            FRFGE              VYFGVSTLLDASS D  K                G+GAGIL
Sbjct: 256  FRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAELAVSDFSGDGAGIL 315

Query: 933  AAASTIISTFLLVFVAEWGDKSFFSTIALAAASSPXXXXXXXXXXXXXXXXXXXXXXXXX 1112
            AAASTI+STFLLVFVAEWGDKSFFSTI    +SSP                         
Sbjct: 316  AAASTIVSTFLLVFVAEWGDKSFFSTI--GESSSPLGVIAGSLAGHGVATLIAVLGGSLL 373

Query: 1113 XTFLSEKVIAYVGGILFLVFAAVTVIEIV 1199
             TFLSEKVIAY+GG+LFLVFAAVTV EIV
Sbjct: 374  GTFLSEKVIAYIGGVLFLVFAAVTVFEIV 402



 Score = 52.4 bits (124), Expect(2) = 4e-62
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +2

Query: 302 DKSYRNKLTAKTSLPSKDISIDTLWNSYLKFMLFFGILTLQDAQSALAGSDVASLLQSSS 481
           D S      ++  L ++++S D    + LKFMLF     LQDA  A+A SD A+ L S  
Sbjct: 122 DDSVAENSDSQCQLATQNVSSDDASMTVLKFMLFSAFFALQDAFPAVAASDFATGLNSIP 181

Query: 482 FFGDLSDISTG 514
            FGD+ D+STG
Sbjct: 182 IFGDVGDLSTG 192


>ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycine max]
            gi|255636411|gb|ACU18544.1| unknown [Glycine max]
          Length = 347

 Score =  227 bits (579), Expect(2) = 4e-61
 Identities = 127/209 (60%), Positives = 136/209 (65%)
 Frame = +3

Query: 573  AFLLIFFSELGDKTFFIXXXXXXXXXXXVVFLGTFGALGVMTIISVVLGRTFHYVDEILP 752
            AFLLIFFSELGDKTFFI           VVF+GTFGAL  MT+ISVVLGRTFHYVDEILP
Sbjct: 138  AFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILP 197

Query: 753  FRFGEMXXXXXXXXXXXXXVYFGVSTLLDASSGDGLKXXXXXXXXXXXXXXVFGNGAGIL 932
            FRFGE              VYFGVSTLLDASS DG K                GNGAGIL
Sbjct: 198  FRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGIL 257

Query: 933  AAASTIISTFLLVFVAEWGDKSFFSTIALAAASSPXXXXXXXXXXXXXXXXXXXXXXXXX 1112
            +AAST+ STFLLVFVAEWGDKSFFSTIALAAASSP                         
Sbjct: 258  SAASTVASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLL 317

Query: 1113 XTFLSEKVIAYVGGILFLVFAAVTVIEIV 1199
             T+LSEKVIAY+GG+LFLVFAA+T+ EIV
Sbjct: 318  GTYLSEKVIAYIGGVLFLVFAAITLFEIV 346



 Score = 35.4 bits (80), Expect(2) = 4e-61
 Identities = 25/60 (41%), Positives = 31/60 (51%)
 Frame = +2

Query: 335 TSLPSKDISIDTLWNSYLKFMLFFGILTLQDAQSALAGSDVASLLQSSSFFGDLSDISTG 514
           +S P+   S   L NS    ML F  LTLQ +  ALA S        S+ FGD+ D+STG
Sbjct: 84  SSHPASTNSSTKLLNS----MLLFAFLTLQPSYPALAASS-----DFSTIFGDIGDLSTG 134


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