BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012086
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    89   2e-23
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    88   9e-23
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    87   2e-21
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...    75   5e-20
ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Me...    73   7e-18

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 89.0 bits (219), Expect(2) = 2e-23
 Identities = 54/128 (42%), Positives = 65/128 (50%)
 Frame = +2

Query: 5   LNRLRLVNCYNITCHGLSHTVKMLPHLETLHLFYISIYVEDIEVXXXXXXXXXXXXXXXX 184
           +  LRLV+CY I+  GLS  +K LP L  + L Y S   E +E                 
Sbjct: 118 IRHLRLVSCYGISDDGLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQ 177

Query: 185 XXXXXXXXXXXXXXXFRGQRVECDGDAFAIANTMPALRHLQLFGNQMTNVGLQAILQGCP 364
                          FR   +ECD +A AIA  MP L+ LQLFGN++TN GL AIL GC 
Sbjct: 178 G--------------FRHPHIECDEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCC 223

Query: 365 HLESLDLR 388
           HLESLDLR
Sbjct: 224 HLESLDLR 231



 Score = 47.0 bits (110), Expect(2) = 2e-23
 Identities = 29/68 (42%), Positives = 36/68 (52%)
 Frame = +3

Query: 489 ERIKDLKCPGDSTEDSEFTPLFHDYDESDDIYSSGYSDVDDNLLDDFYEDLAFSDDGTFI 668
           E+IK L+ P DST+D EF    HD    D+ Y SG SD+D     D+Y+   FSD   F 
Sbjct: 248 EQIKILRYPNDSTDDYEFDAEIHDDASFDEEYPSGISDLDLLSDGDYYD---FSDGSDFS 304

Query: 669 CDDDDYYD 692
             D   YD
Sbjct: 305 EYDPSDYD 312


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 87.8 bits (216), Expect(2) = 9e-23
 Identities = 52/128 (40%), Positives = 64/128 (50%)
 Frame = +2

Query: 5   LNRLRLVNCYNITCHGLSHTVKMLPHLETLHLFYISIYVEDIEVXXXXXXXXXXXXXXXX 184
           L  LRL  CY I+  GL    + LP LE L +   ++  + +E                 
Sbjct: 111 LRSLRLACCYQISDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNME 170

Query: 185 XXXXXXXXXXXXXXXFRGQRVECDGDAFAIANTMPALRHLQLFGNQMTNVGLQAILQGCP 364
                          +R   +ECD +AFAIA TMP L HLQLFGN++TN GL AIL GCP
Sbjct: 171 G--------------YRRPHIECDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCP 216

Query: 365 HLESLDLR 388
            LESLDLR
Sbjct: 217 LLESLDLR 224



 Score = 45.8 bits (107), Expect(2) = 9e-23
 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +3

Query: 489 ERIKDLKCPGDSTEDSEFTPLFHDYDESDDIYSSGYSDVDDNLLDDFYEDLAFSDDGTFI 668
           E+IK+L+ P D T+D  F     DY   D+ Y SG SD+ D L DD Y+   FS    F 
Sbjct: 241 EQIKELRLPCDPTDDYPFEAEI-DYGSLDEDYPSGISDI-DFLSDDDYDYYEFSGGSDFS 298

Query: 669 CDDD---DYYD 692
             DD   DYYD
Sbjct: 299 EYDDDHPDYYD 309


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 87.0 bits (214), Expect(2) = 2e-21
 Identities = 55/129 (42%), Positives = 64/129 (49%)
 Frame = +2

Query: 2   KLNRLRLVNCYNITCHGLSHTVKMLPHLETLHLFYISIYVEDIEVXXXXXXXXXXXXXXX 181
           +L+RLRLV C  I+  GL   V  LP LE L L + S  VE +E                
Sbjct: 114 QLSRLRLVYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNR 173

Query: 182 XXXXXXXXXXXXXXXXFRGQRVECDGDAFAIANTMPALRHLQLFGNQMTNVGLQAILQGC 361
                              +RVECD  A AIA  MP LRHL +FGN +TN GL+AIL GC
Sbjct: 174 QFY----------------RRVECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGC 217

Query: 362 PHLESLDLR 388
             LESLDLR
Sbjct: 218 SALESLDLR 226



 Score = 42.4 bits (98), Expect(2) = 2e-21
 Identities = 25/68 (36%), Positives = 32/68 (47%)
 Frame = +3

Query: 489 ERIKDLKCPGDSTEDSEFTPLFHDYDESDDIYSSGYSDVDDNLLDDFYEDLAFSDDGTFI 668
           E+IKDL+ P D T+D EFT    D               DD+  DD Y+      D   +
Sbjct: 243 EKIKDLRLPHDPTDDCEFTTEIVD---------------DDDTYDDDYDYPFGLSDTDLL 287

Query: 669 CDDDDYYD 692
            DDDDYY+
Sbjct: 288 TDDDDYYE 295


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score = 74.7 bits (182), Expect(2) = 5e-20
 Identities = 45/128 (35%), Positives = 62/128 (48%)
 Frame = +2

Query: 5   LNRLRLVNCYNITCHGLSHTVKMLPHLETLHLFYISIYVEDIEVXXXXXXXXXXXXXXXX 184
           L RLRL++ Y ++    S   K  P LE L + Y S+  E +                  
Sbjct: 117 LKRLRLLSSYTLSDAAFSKAAKKFPLLEELDISYCSLSTEAL--------------VGVG 162

Query: 185 XXXXXXXXXXXXXXXFRGQRVECDGDAFAIANTMPALRHLQLFGNQMTNVGLQAILQGCP 364
                          ++   +E + +A AI   MP LR+LQ+FGN++TN G+QAIL GCP
Sbjct: 163 ISCPLLRSLKLNCQGYKRPHIESNEEALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCP 222

Query: 365 HLESLDLR 388
           HLE LDLR
Sbjct: 223 HLEFLDLR 230



 Score = 49.7 bits (117), Expect(2) = 5e-20
 Identities = 28/67 (41%), Positives = 36/67 (53%)
 Frame = +3

Query: 489 ERIKDLKCPGDSTEDSEFTPLFHDYDESDDIYSSGYSDVDDNLLDDFYEDLAFSDDGTFI 668
           ERIKDL+ P D T+D  F P   DY  S++ Y SG+SD++            F+ D    
Sbjct: 247 ERIKDLRRPDDPTDDYPFNPEIPDYGSSEEDYPSGFSDME------------FATD---- 290

Query: 669 CDDDDYY 689
            DDDDYY
Sbjct: 291 -DDDDYY 296


>ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355482929|gb|AES64132.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 208

 Score = 72.8 bits (177), Expect(2) = 7e-18
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +2

Query: 251 CDGDAFAIANTMPALRHLQLFGNQMTNVGLQAILQGCPHLESLDLR 388
           CD  AF+IA TMP LRHLQLFGN+M+N GL+AIL GCP LESLD+R
Sbjct: 11  CDDVAFSIAETMPGLRHLQLFGNKMSNDGLRAILDGCPLLESLDIR 56



 Score = 44.3 bits (103), Expect(2) = 7e-18
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 489 ERIKDLKCPGDSTEDSEFTPLFHDY--DESDDIYSSGYSDVDDNLLDDFYEDLAFS 650
           E+IKDL+ P D+TED  F  + +DY   + D+ Y SG SD+ D L DD YE   FS
Sbjct: 73  EQIKDLRLPYDATEDYPFQVIAYDYGSPDEDEDYPSGISDM-DLLSDDDYEYDEFS 127