BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012049
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [...   450   e-124
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   449   e-124
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp....   449   e-124
ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-l...   446   e-123
ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidops...   442   e-122

>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
            gi|296082105|emb|CBI21110.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  450 bits (1157), Expect = e-124
 Identities = 226/275 (82%), Positives = 250/275 (90%)
 Frame = +2

Query: 239  MVGLSVGEEHFIQGGIAQDLRTDGRKRLTYRPIFLETGVIAQANGSARVKMGRTEVIASV 418
            MVGLSVGE+HFIQGGIAQDLRTDGR+RLTYRP  +ETGVI QANGSARV++G T+VIASV
Sbjct: 1    MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASV 60

Query: 419  KAELGRPSSSAPDKGKVSIYIDCSPTAAPQFEGRGGEELSMELCASLRQCLLGGKSGAGA 598
            KAELG+PS S PDKGKV+IY+DCSPTAAP FEGRGGEELS EL  +L+ CLLGGKSGAGA
Sbjct: 61   KAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLGGKSGAGA 120

Query: 599  GINLSSLSIVDGKVCWDLYIDGLVISMDGNILDALGAAIKAALSNTGIPKVNVASAAPSD 778
            GI+LSSL +V+GKVCWDLYIDGLV+S DGN+LDALGAAIKAAL+NTGIPKV VA  A  D
Sbjct: 121  GIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVEVAVGASGD 180

Query: 779  EQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESQMSAAVSVSINRQGSIC 958
              PEVD+SD+E+LQFDT+ VPVIVTLTKVGRHYIVDAT EEESQMS+AVSVS++ QG IC
Sbjct: 181  GLPEVDISDDEYLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVSGQGRIC 240

Query: 959  GLTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDS 1063
            GL KRGGAGLDPSVILDMISVAKHVSEQLMNKLDS
Sbjct: 241  GLIKRGGAGLDPSVILDMISVAKHVSEQLMNKLDS 275


>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  449 bits (1155), Expect = e-124
 Identities = 223/275 (81%), Positives = 250/275 (90%)
 Frame = +2

Query: 239  MVGLSVGEEHFIQGGIAQDLRTDGRKRLTYRPIFLETGVIAQANGSARVKMGRTEVIASV 418
            MVGLS+GE HFIQGGIAQDLR DGRKRLTYRPI +ETGVI Q NGSARV+MG T+VIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 419  KAELGRPSSSAPDKGKVSIYIDCSPTAAPQFEGRGGEELSMELCASLRQCLLGGKSGAGA 598
            KAELG+PS   PDKGKVSIY+DCS TA P FEGRGG+EL+ EL  +L++CLLGGKSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120

Query: 599  GINLSSLSIVDGKVCWDLYIDGLVISMDGNILDALGAAIKAALSNTGIPKVNVASAAPSD 778
            GI+LSSL +V+GK+CWDLYIDGLV+S DGN+LDALGAAIKAALSNTGIP+V VA+   +D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180

Query: 779  EQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESQMSAAVSVSINRQGSIC 958
            E PEVDVSDEEFLQFDT+ VPVIVTLTKVGRHYIVDATSEEESQMS+AVS+S+NRQG IC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 959  GLTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDS 1063
            G+TKRGG GLDPS+ILDMISVAKHVSEQL+NKLDS
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDS 275


>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328387|gb|EFH58806.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score =  449 bits (1154), Expect = e-124
 Identities = 221/275 (80%), Positives = 253/275 (92%)
 Frame = +2

Query: 239  MVGLSVGEEHFIQGGIAQDLRTDGRKRLTYRPIFLETGVIAQANGSARVKMGRTEVIASV 418
            MVGLS+GE+HF++GGIAQDLRTDGRKRLTYRPI++ETGVI QANGSARVK+G T+VIASV
Sbjct: 1    MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60

Query: 419  KAELGRPSSSAPDKGKVSIYIDCSPTAAPQFEGRGGEELSMELCASLRQCLLGGKSGAGA 598
            KAE+GRPSS  PDKGKV+++IDCSPTA P F GRGGEELS EL  +L++CLLGGKSGAGA
Sbjct: 61   KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120

Query: 599  GINLSSLSIVDGKVCWDLYIDGLVISMDGNILDALGAAIKAALSNTGIPKVNVASAAPSD 778
            GINLSSL I +GKVCWDLYIDGLVIS DGN+LDALGAAIKAAL+NT IPKVNV++    D
Sbjct: 121  GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180

Query: 779  EQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESQMSAAVSVSINRQGSIC 958
            EQPE+D+SDEE+LQFDT++VPVIVTLTKVG HYIVDAT+EEESQMS+AVS+S+NR G IC
Sbjct: 181  EQPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRAGHIC 240

Query: 959  GLTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDS 1063
            GLTKRGG+GLDPSVILDMISVAKHV+E LM+KLDS
Sbjct: 241  GLTKRGGSGLDPSVILDMISVAKHVTENLMSKLDS 275


>ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  446 bits (1146), Expect = e-123
 Identities = 222/275 (80%), Positives = 247/275 (89%)
 Frame = +2

Query: 239  MVGLSVGEEHFIQGGIAQDLRTDGRKRLTYRPIFLETGVIAQANGSARVKMGRTEVIASV 418
            MVGLS+GE HFIQGGIAQDLR DGRKRLTYRPI +ETGVI Q NGSARV+MG T+VIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 419  KAELGRPSSSAPDKGKVSIYIDCSPTAAPQFEGRGGEELSMELCASLRQCLLGGKSGAGA 598
            KAELG+PS   PDKGKVSIYIDCS TA P FEGRGG+EL+ EL  +L+ CLLGGKSG GA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGA 120

Query: 599  GINLSSLSIVDGKVCWDLYIDGLVISMDGNILDALGAAIKAALSNTGIPKVNVASAAPSD 778
            GI+LSSL +V+GK+CWDLYIDGLV+S DGN+LDALGAAIKAALSNTGIP+V VA+   +D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSND 180

Query: 779  EQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESQMSAAVSVSINRQGSIC 958
            E PEVDVSDEEFLQFDT+ VPVIVTLTKVGRHYIVDATSEEESQMS+ VS+S+NRQG IC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC 240

Query: 959  GLTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDS 1063
            G+TKRGG GLDPS+ILDMISVAKHVSEQL+NKLDS
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDS 275


>ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
            gi|30680427|ref|NP_850537.1| 3'-5'-exoribonuclease family
            protein [Arabidopsis thaliana]
            gi|11762184|gb|AAG40370.1|AF325018_1 AT3g07750
            [Arabidopsis thaliana] gi|26453010|dbj|BAC43581.1|
            putative 3' exoribonuclease [Arabidopsis thaliana]
            gi|56744222|gb|AAW28551.1| At3g07750 [Arabidopsis
            thaliana] gi|332641077|gb|AEE74598.1|
            3'-5'-exoribonuclease family protein [Arabidopsis
            thaliana] gi|332641078|gb|AEE74599.1|
            3'-5'-exoribonuclease family protein [Arabidopsis
            thaliana]
          Length = 286

 Score =  442 bits (1137), Expect = e-122
 Identities = 218/274 (79%), Positives = 251/274 (91%)
 Frame = +2

Query: 242  VGLSVGEEHFIQGGIAQDLRTDGRKRLTYRPIFLETGVIAQANGSARVKMGRTEVIASVK 421
            +GLS+GE+HFI+GGIAQDLRTDGRKRLTYRPI++ETGVI QANGSARV++G T+VIASVK
Sbjct: 1    MGLSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVK 60

Query: 422  AELGRPSSSAPDKGKVSIYIDCSPTAAPQFEGRGGEELSMELCASLRQCLLGGKSGAGAG 601
            AE+GRPSS  PDKGKV+++IDCSPTA P F GRGGEELS EL  +L++CLLGGKSGAGAG
Sbjct: 61   AEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAG 120

Query: 602  INLSSLSIVDGKVCWDLYIDGLVISMDGNILDALGAAIKAALSNTGIPKVNVASAAPSDE 781
            INLSSL I +GKVCWDLYIDGLVIS DGN+LDALGAAIKAAL+NT IPKVNV++    DE
Sbjct: 121  INLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADDE 180

Query: 782  QPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESQMSAAVSVSINRQGSICG 961
            QPE+D+SDEE+LQFDT++VPVIVTLTKVG HYIVDAT+EEESQMS+AVS+S+NR G ICG
Sbjct: 181  QPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICG 240

Query: 962  LTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDS 1063
            LTKR G+GLDPSVILDMISVAKHV+E LM+KLDS
Sbjct: 241  LTKRSGSGLDPSVILDMISVAKHVTETLMSKLDS 274