BLASTX nr result

ID: Atractylodes21_contig00012010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00012010
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   310   2e-82
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   310   2e-82
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   309   4e-82
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   308   7e-82
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   305   1e-80

>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  310 bits (794), Expect = 2e-82
 Identities = 171/262 (65%), Positives = 196/262 (74%), Gaps = 12/262 (4%)
 Frame = -1

Query: 750 LQEGMTNLGKSGGVYVRPFKMAR----IEDKSSMEHQRMTWDALQKSINGLVNKVNATNI 583
           L    +NLGKSGGVY+ PFK+AR    ++DKSS+E+QR+TWDAL+KSINGLVNKVNATNI
Sbjct: 211 LNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNI 270

Query: 582 KNIIPKLFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNTRFPEVGDXXXXXXX 403
           KNIIP+LFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT+FPEVGD       
Sbjct: 271 KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIV 330

Query: 402 LQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXXXXXXXXXXXDSVEVAAGFLT 223
           LQ +RAYK+NDKP+LLAAVKFIAHL+NQQV H                 DSVEVA GF+T
Sbjct: 331 LQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVT 390

Query: 222 ECGSILEDLCPEGLHGIFER----LCEGEVVKRV----EGLFALRNANFQGHPAVRPXXX 67
           ECGSIL+DL P+GLHGIFER    L EGE+ KRV    EGLFA+R A F+G+PAVRP   
Sbjct: 391 ECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRP--- 447

Query: 66  XXXXXXXXXXLTHEASLLDKID 1
                     LTHE SL ++ID
Sbjct: 448 ELDLVEQEDQLTHEISLQEEID 469


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  310 bits (794), Expect = 2e-82
 Identities = 171/262 (65%), Positives = 196/262 (74%), Gaps = 12/262 (4%)
 Frame = -1

Query: 750 LQEGMTNLGKSGGVYVRPFKMAR----IEDKSSMEHQRMTWDALQKSINGLVNKVNATNI 583
           L    +NLGKSGGVY+ PFK+AR    ++DKSS+E+QR+TWDAL+KSINGLVNKVNATNI
Sbjct: 211 LNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNI 270

Query: 582 KNIIPKLFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNTRFPEVGDXXXXXXX 403
           KNIIP+LFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT+FPEVGD       
Sbjct: 271 KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIV 330

Query: 402 LQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXXXXXXXXXXXDSVEVAAGFLT 223
           LQ +RAYK+NDKP+LLAAVKFIAHL+NQQV H                 DSVEVA GF+T
Sbjct: 331 LQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVT 390

Query: 222 ECGSILEDLCPEGLHGIFER----LCEGEVVKRV----EGLFALRNANFQGHPAVRPXXX 67
           ECGSIL+DL P+GLHGIFER    L EGE+ KRV    EGLFA+R A F+G+PAVRP   
Sbjct: 391 ECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRP--- 447

Query: 66  XXXXXXXXXXLTHEASLLDKID 1
                     LTHE SL ++ID
Sbjct: 448 ELDLVEQEDQLTHEISLQEEID 469


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  309 bits (792), Expect = 4e-82
 Identities = 170/262 (64%), Positives = 195/262 (74%), Gaps = 12/262 (4%)
 Frame = -1

Query: 750  LQEGMTNLGKSGGVYVRPFKMA----RIEDKSSMEHQRMTWDALQKSINGLVNKVNATNI 583
            L   ++NLGKSGGVY+ PFKMA     ++DKSS+E+QR+TWDAL+KSINGLVNKVNATNI
Sbjct: 274  LNGDVSNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNI 333

Query: 582  KNIIPKLFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNTRFPEVGDXXXXXXX 403
            KNIIP+LFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT+FPEVGD       
Sbjct: 334  KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIV 393

Query: 402  LQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXXXXXXXXXXXDSVEVAAGFLT 223
            LQ +RAYK+NDKP+LLAAVKFIAHL+NQQ  H                 DSVEVA GF+T
Sbjct: 394  LQLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVT 453

Query: 222  ECGSILEDLCPEGLHGIFER----LCEGEVVKRV----EGLFALRNANFQGHPAVRPXXX 67
            ECGSIL+DL P+GLHGIFER    L EGE+ KRV    EGLFA+R A FQG+PAVRP   
Sbjct: 454  ECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRP--- 510

Query: 66   XXXXXXXXXXLTHEASLLDKID 1
                      +THE SL ++ID
Sbjct: 511  ELDLVEQEDQITHEVSLDEEID 532


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  308 bits (790), Expect = 7e-82
 Identities = 169/257 (65%), Positives = 193/257 (75%), Gaps = 12/257 (4%)
 Frame = -1

Query: 735  TNLGKSGGVYVRPFKMA----RIEDKSSMEHQRMTWDALQKSINGLVNKVNATNIKNIIP 568
            +NLGKSGGVY+ PFKMA     ++DKSS+E+QR+TWDAL+KSINGLVNKVNATNIKNIIP
Sbjct: 295  SNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIP 354

Query: 567  KLFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNTRFPEVGDXXXXXXXLQFQR 388
            +LFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT+FPEVGD       LQ +R
Sbjct: 355  ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKR 414

Query: 387  AYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXXXXXXXXXXXDSVEVAAGFLTECGSI 208
            AYK+NDKP+LLAAVKFIAHL+NQQ  H                 DSVEVA GF+TECGSI
Sbjct: 415  AYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSI 474

Query: 207  LEDLCPEGLHGIFER----LCEGEVVKRV----EGLFALRNANFQGHPAVRPXXXXXXXX 52
            L+DL P+GLHGIFER    L EGE+ KRV    EGLFA+R A FQG+PAVRP        
Sbjct: 475  LQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRP---ELDLV 531

Query: 51   XXXXXLTHEASLLDKID 1
                 +THE SL ++ID
Sbjct: 532  EQEDQITHEVSLDEEID 548


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  305 bits (780), Expect = 1e-80
 Identities = 168/264 (63%), Positives = 195/264 (73%), Gaps = 12/264 (4%)
 Frame = -1

Query: 756 AELQEGMTNLGKSGGVYVRPFKMAR----IEDKSSMEHQRMTWDALQKSINGLVNKVNAT 589
           + L   ++N G+SGGVY+ PFK+A+    ++DKSS+E+QR+TWDAL+KSINGLVNKVNAT
Sbjct: 192 SSLNADVSNWGRSGGVYIPPFKLAQMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNAT 251

Query: 588 NIKNIIPKLFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNTRFPEVGDXXXXX 409
           NIKNIIP+LF ENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT+FPEVG+     
Sbjct: 252 NIKNIIPELFGENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLMRR 311

Query: 408 XXLQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXXXXXXXXXXXDSVEVAAGF 229
             LQF+RAYK+NDK +LLAAVKFIAHL+NQQV H                 DSVEVA GF
Sbjct: 312 IVLQFKRAYKRNDKHQLLAAVKFIAHLVNQQVAHEIIALELLALMLENPTDDSVEVAVGF 371

Query: 228 LTECGSILEDLCPEGLHGIFER----LCEGEVVKRV----EGLFALRNANFQGHPAVRPX 73
           + ECGSIL+DL P+GLHGIFER    L EGE+ KRV    EGLFA+R A FQGHPAVRP 
Sbjct: 372 VKECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRP- 430

Query: 72  XXXXXXXXXXXXLTHEASLLDKID 1
                       LTHE SL +KID
Sbjct: 431 --ELDLVEQEDQLTHEISLEEKID 452


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