BLASTX nr result

ID: Atractylodes21_contig00011983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011983
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298062.1| f-box family protein [Populus trichocarpa] g...    59   5e-07
ref|XP_002304470.1| f-box family protein [Populus trichocarpa] g...    55   6e-06
ref|XP_002283923.1| PREDICTED: F-box protein PP2-A15 [Vitis vini...    55   6e-06

>ref|XP_002298062.1| f-box family protein [Populus trichocarpa]
           gi|222845320|gb|EEE82867.1| f-box family protein
           [Populus trichocarpa]
          Length = 299

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/42 (69%), Positives = 31/42 (73%)
 Frame = +2

Query: 98  SAPTALSEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFR 223
           S P    +PGLGDLPES V  VL YL+P EICRLA LNRAFR
Sbjct: 26  SPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLAKLNRAFR 67


>ref|XP_002304470.1| f-box family protein [Populus trichocarpa]
           gi|222841902|gb|EEE79449.1| f-box family protein
           [Populus trichocarpa]
          Length = 298

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 98  SAPTALSEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFR 223
           S+P A ++P LGDLPE  V  +L YL+PQEIC+LA LNRAFR
Sbjct: 26  SSPPA-TKPSLGDLPEGCVALILEYLNPQEICKLARLNRAFR 66


>ref|XP_002283923.1| PREDICTED: F-box protein PP2-A15 [Vitis vinifera]
           gi|147860674|emb|CAN81450.1| hypothetical protein
           VITISV_025851 [Vitis vinifera]
           gi|297740037|emb|CBI30219.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = +2

Query: 86  NSTTSAPTALSEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFR 223
           N T  A  +   PGLGD+PES V  V +YL+P EIC LA LNRAFR
Sbjct: 7   NLTEGANGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFR 52


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