BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011982
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   176   1e-42
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   176   1e-42
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   171   6e-41
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ...   171   7e-41

>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/106 (80%), Positives = 95/106 (89%)
 Frame = +3

Query: 3   PSIDRIAESLNISRKKVMNATQAITKVFSLDKGAFPSINGLPGQTLYSYIADNCMENNPW 182
           PSIDRIAE LN+S+KKV NAT+AI+KVFSLD+ AFPS+NGLPG+TL+SYIAD  +ENNPW
Sbjct: 356 PSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPW 415

Query: 183 HGIDEEALKDEVNKLITMTLGERERYIIRLYYGLDNECLIWEDIGK 320
           HG+DE ALKDEVNKLI  TLGERER IIRLYYGLDNECL WEDI K
Sbjct: 416 HGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISK 461


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/106 (80%), Positives = 95/106 (89%)
 Frame = +3

Query: 3   PSIDRIAESLNISRKKVMNATQAITKVFSLDKGAFPSINGLPGQTLYSYIADNCMENNPW 182
           PSIDRIAE LN+S+KKV NAT+AI+KVFSLD+ AFPS+NGLPG+TL+SYIAD  +ENNPW
Sbjct: 414 PSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPW 473

Query: 183 HGIDEEALKDEVNKLITMTLGERERYIIRLYYGLDNECLIWEDIGK 320
           HG+DE ALKDEVNKLI  TLGERER IIRLYYGLDNECL WEDI K
Sbjct: 474 HGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISK 519


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  176 bits (447), Expect = 1e-42
 Identities = 83/106 (78%), Positives = 96/106 (90%)
 Frame = +3

Query: 3   PSIDRIAESLNISRKKVMNATQAITKVFSLDKGAFPSINGLPGQTLYSYIADNCMENNPW 182
           PSIDRIAESLNIS+KKV NAT+A++KVFSLD+ AFPS+NGLPG+T +SYIADNC+ENNPW
Sbjct: 367 PSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW 426

Query: 183 HGIDEEALKDEVNKLITMTLGERERYIIRLYYGLDNECLIWEDIGK 320
           HG+D+ ALKDEVNKLI +TL ERE+ IIRLYYGLDNE L WEDI K
Sbjct: 427 HGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISK 472


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/106 (75%), Positives = 94/106 (88%)
 Frame = +3

Query: 3   PSIDRIAESLNISRKKVMNATQAITKVFSLDKGAFPSINGLPGQTLYSYIADNCMENNPW 182
           PS+DRIAESLN+S+KKV NAT+AI+KVFSLD+ AFPS+NGLPG+T +SYIADNC+ENNPW
Sbjct: 367 PSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW 426

Query: 183 HGIDEEALKDEVNKLITMTLGERERYIIRLYYGLDNECLIWEDIGK 320
           HG D   LK EVN+LI MTLG+RER IIRLY+GLDNECL WE+I K
Sbjct: 427 HGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISK 472


>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 503

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/106 (75%), Positives = 95/106 (89%)
 Frame = +3

Query: 3   PSIDRIAESLNISRKKVMNATQAITKVFSLDKGAFPSINGLPGQTLYSYIADNCMENNPW 182
           PSIDRIAESLN+S+KKV NAT+A++K+FSLD+ AFPS+NGLPG+T +SYIADN +ENNPW
Sbjct: 362 PSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNRVENNPW 421

Query: 183 HGIDEEALKDEVNKLITMTLGERERYIIRLYYGLDNECLIWEDIGK 320
           HG D+ ALK+EV+KLI+ TLGERER IIRLYYGLD ECL WEDI K
Sbjct: 422 HGYDDLALKEEVSKLISATLGEREREIIRLYYGLDKECLTWEDISK 467