BLASTX nr result
ID: Atractylodes21_contig00011896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00011896
(1570 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 543 e-152
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 517 e-144
ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|2... 491 e-136
ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 491 e-136
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc... 491 e-136
>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 543 bits (1400), Expect = e-152
Identities = 280/474 (59%), Positives = 337/474 (71%), Gaps = 30/474 (6%)
Frame = -1
Query: 1570 CSWQWYYPYHYAPFASDLNDLADLEITFFLGEPFKPFDQLMGTLPAASSSALPDNYRKLM 1391
CSWQWYYP+HYAPFASDL DL DLEITFFLGEPFKPFDQLMGTLPAAS+S+LP+NYRKLM
Sbjct: 480 CSWQWYYPFHYAPFASDLKDLVDLEITFFLGEPFKPFDQLMGTLPAASASSLPENYRKLM 539
Query: 1390 TDPSSPIIEFYPFDFDIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLEDTLTFEEHARNR 1211
TD SSPI++FYP DF+IDMNGKR+AWQGVAKLPFIDE+KLL ET+KLE TLT EE RN
Sbjct: 540 TDQSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEEQVRNS 599
Query: 1210 VLCDLLYVSPRNSLAPQIIAYYNFFYKMHPSQRWAWPIDVNASGGMNGYLWLCERNGCRL 1031
V+ DLLYV + LA QII YY+F+ P R WPID+NASGGMNGYLWLCERNG R
Sbjct: 600 VMFDLLYVHAVHPLATQIIYYYHFYQSSPPLARVIWPIDINASGGMNGYLWLCERNGWRS 659
Query: 1030 VLPSPISGLGDIMDNHVLNATYINXXXXXXXXXXXKGVAMPKKILKPFDIKPLPVLWHED 851
PS ISGL +I N V N TY+N GV MP+K+L+PFDIKPLPVLWHED
Sbjct: 660 EFPSSISGLQNIEHNQVFNVTYVNPPHHKHIPEPPMGVVMPEKVLRPFDIKPLPVLWHED 719
Query: 850 NTGRRFQGRDSRPQVPGAIHGNMLGEAAHRLLKNSLNIRSSGTSSGYFEQSQYRNVPGNN 671
N GRR QGR+ RPQVP AI G +LGEAAHRLLKN+LNI+ + TSSG Q+ YRN+P N
Sbjct: 720 NGGRRQQGRE-RPQVPRAISGPLLGEAAHRLLKNTLNIKPNNTSSGMLLQTPYRNMPSNY 778
Query: 670 LQHRPRPAGPSGHGRNFNEDPNFYHG-YPNPRGMMPRPRLGFSP-PNHLQGNRPNLKAQE 497
+ +RPRPAGPSG+ + FN D N+Y+G Y NPRG + PR F P PN++QGNR N + Q+
Sbjct: 779 VVNRPRPAGPSGYEKGFNGDSNYYYGHYDNPRGALSIPR--FPPSPNNMQGNRQNFRVQD 836
Query: 496 RYTYQDQYQDLRN---GMSALTMDGGIRSRP---YPVRMPQPQNL---------HGNLPS 362
R T+QDQY++ R GMS LT++ G+R+R P RMP + + + P+
Sbjct: 837 RSTFQDQYRNSRTGIMGMSTLTIEEGVRTRQPIVRPSRMPSAADTLNTNNQFVQNKSPPA 896
Query: 361 PPPTWINRGEDGN------------PGSYDNQVKKIYTIKTR-VPQNSYPGIQQ 239
PP WI R GN G+Y+ +KK+Y +K + + +S PG QQ
Sbjct: 897 PPSKWIERQATGNAGMIVRQQDNVSAGTYEKPIKKVYQVKMQHLQDSSDPGSQQ 950
>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 964
Score = 517 bits (1332), Expect = e-144
Identities = 263/463 (56%), Positives = 320/463 (69%), Gaps = 27/463 (5%)
Frame = -1
Query: 1570 CSWQWYYPYHYAPFASDLNDLADLEITFFLGEPFKPFDQLMGTLPAASSSALPDNYRKLM 1391
CSWQW+YPYHYAPFASDL LADLEITFFLGEPFKPFDQLMGTLPAASS+ALP+ YRKLM
Sbjct: 492 CSWQWFYPYHYAPFASDLKGLADLEITFFLGEPFKPFDQLMGTLPAASSNALPEEYRKLM 551
Query: 1390 TDPSSPIIEFYPFDFDIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLEDTLTFEEHARNR 1211
TD SSPI F+P DF+IDMNGKRFAWQG+AKLPFIDE+KLL +T+KLE TLT EE RN
Sbjct: 552 TDSSSPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEERLRNS 611
Query: 1210 VLCDLLYVSPRNSLAPQIIAYYNFFYKMHPSQRWAWPIDVNASGGMNGYLWLCERNGCRL 1031
V+ DLLYV P + +A ++IA+Y F + QR W ID NAS GMNGYLWL ERN R
Sbjct: 612 VMLDLLYVHPAHPMAAEVIAHYQGFNSLPQYQRKPWAIDTNASAGMNGYLWLSERNMWRS 671
Query: 1030 VLPSPISGLGDIMDNHVLNATYINXXXXXXXXXXXKGVAMPKKILKPFDIKPLPVLWHED 851
+ SP++G DI N VLN TY+N GV MP+KILKP DIKP P+LWHED
Sbjct: 672 TIASPVNGFPDIEHNQVLNITYLNPINHRHIPEPPNGVVMPEKILKPLDIKPFPMLWHED 731
Query: 850 NTGRRFQGRDSRPQVPGAIHGNMLGEAAHRLLKNSLNIRSSGTSSGYFEQSQYRNVPGNN 671
+ GRR QGR+ RPQV AI G +LGEAAHRL+KN+LNIR +G+SS + EQ YRN+PGN+
Sbjct: 732 HGGRRQQGRE-RPQVARAIAGPLLGEAAHRLVKNTLNIRPNGSSSKFLEQQTYRNIPGNS 790
Query: 670 LQHRPRPAGPSGHGRNFNEDPNFYHGYPN-PRGMMPRPRLGFSP--PNHLQGNRPNLKAQ 500
+RPRPAGPSG+ R ++ DPN+Y+G+ N +G+M PR SP N + NR N + Q
Sbjct: 791 TFNRPRPAGPSGYERGYSNDPNYYYGHHNYQQGLMSNPR---SPLFSNGVSSNRHNFRTQ 847
Query: 499 ERYTYQDQYQDLRNGMSALTMDGGIRSRPYPVRMPQPQNLH-------------GNLPSP 359
+R Y +QY+DL+ GMSALTM+ ++SRP V + QN G LPSP
Sbjct: 848 DRVQYHEQYRDLKTGMSALTMEENVKSRPPAVMSQRTQNTGYSSSLQQQFEQNLGALPSP 907
Query: 358 PPTWINRGEDGNP-----------GSYDNQVKKIYTIKTRVPQ 263
P WI + D + G+ + Q K+IY +KTR Q
Sbjct: 908 PAKWIGKATDTDAEMYFRQETMLRGANEKQAKQIYQVKTRAAQ 950
>ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|222857428|gb|EEE94975.1|
predicted protein [Populus trichocarpa]
Length = 965
Score = 491 bits (1264), Expect = e-136
Identities = 256/468 (54%), Positives = 320/468 (68%), Gaps = 25/468 (5%)
Frame = -1
Query: 1570 CSWQWYYPYHYAPFASDLNDLADLEITFFLGEPFKPFDQLMGTLPAASSSALPDNYRKLM 1391
CSWQW+YP+HYAPFASDL DL ++E+ FF+GEPFKPFDQLMGTLPAASS+ALP YRKLM
Sbjct: 492 CSWQWFYPFHYAPFASDLKDLGEVELNFFIGEPFKPFDQLMGTLPAASSNALPKEYRKLM 551
Query: 1390 TDPSSPIIEFYPFDFDIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLEDTLTFEEHARNR 1211
T+PSSPI F+P DF+IDMNGKRFAWQG+AKLPFIDE+KLL +T+KLE TLT EE RNR
Sbjct: 552 TNPSSPIHRFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEEQIRNR 611
Query: 1210 VLCDLLYVSPRNSLAPQIIAYYNFFYKMHPSQRWAWPIDVNASGGMNGYLWLCERNGCRL 1031
V+ DLLY+ P + LA +I+YY + +R+AW ID ASGGMNG LWL ERN R
Sbjct: 612 VMLDLLYIHPVHPLAQLVISYYQQNDHLSEGERFAWEIDTRASGGMNGCLWLYERNVRRS 671
Query: 1030 VLPSPISGLGDIMDNHVLNATYINXXXXXXXXXXXKGVAMPKKILKPFDIKPLPVLWHED 851
V+PSPI GL + N VLN T++N +GV MP+KI+KP D+KP P LWHED
Sbjct: 672 VVPSPILGLPVLEGNQVLNITFLNPKNRGHIPEIPEGVVMPEKIVKPVDLKPFPTLWHED 731
Query: 850 NTGRRFQGRDSRPQVPGAIHGNMLGEAAHRLLKNSLNIRSSGTSSGYFEQSQYRNVPGNN 671
N GRR QGR+ RPQV AI G LG+AAHRL+KN+LNI+ +G+SS F+Q Y N+PGN
Sbjct: 732 N-GRRQQGRE-RPQVQRAIAGPFLGDAAHRLVKNTLNIKPNGSSSRVFDQQLYHNIPGNY 789
Query: 670 LQHRPRPAGPSGHGRNFNEDPNFYHG-YPNPRGMMPRPRLGFSPPNHLQGNRPNLKAQER 494
+RPRPAGP+G+GR + +DPN+++ + N +G+M PR S N +Q NR N + Q+
Sbjct: 790 TFYRPRPAGPAGYGRGYWDDPNYHYAQHSNQQGLMSNPRYR-SLSNGVQSNRHNFRTQDG 848
Query: 493 YTYQDQYQDLRNGMSALTMDGGIRSRPYPV---RMPQPQNL----------HGNLPSPPP 353
Y QY +L G+SALT++ IRSR V RMP P N G L SPP
Sbjct: 849 VQYHQQYHNLSTGVSALTVEENIRSRAPAVISPRMPNPGNTPNLQNQAEQNTGLLSSPPT 908
Query: 352 TWINRGEDGNPGSY-----------DNQVKKIYTIKTRVPQNSYPGIQ 242
WIN+ GN G Y + QVK++Y +KT+V Q + P IQ
Sbjct: 909 NWINKTAAGNTGMYFKQKSTSIGPNEKQVKQVYQVKTQVAQET-PDIQ 955
>ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 491 bits (1263), Expect = e-136
Identities = 257/469 (54%), Positives = 313/469 (66%), Gaps = 32/469 (6%)
Frame = -1
Query: 1570 CSWQWYYPYHYAPFASDLNDLADLEITFFLGEPFKPFDQLMGTLPAASSSALPDNYRKLM 1391
CSWQWYYPYHY+PFASDL +LADLEITFF+GEPFKPFDQLMGTLPAASS+ALP+ YR LM
Sbjct: 212 CSWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLM 271
Query: 1390 TDPSSPIIEFYPFDFDIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLEDTLTFEEHARNR 1211
TDPSSPI+EFYP DF+IDMNGKRF WQGVAKLPFIDE+KLL +TR+LE +LT EE RN
Sbjct: 272 TDPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNS 331
Query: 1210 VLCDLLYVSPRNSLAPQIIAYYNFFYKMHPSQRWAWPIDVNASGGMNGYLWLCERNGCRL 1031
V+ D+LY + L+ QI +YY ++ P R W ID NASGGMNGYLWLCERN R
Sbjct: 332 VMLDMLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRN 391
Query: 1030 VLPSPISGLGDIMDNHVLNATYINXXXXXXXXXXXKGVAMPKKILKPFDIKPLPVLWHED 851
V+ SPI+ L DI N VLN TY+N KG +PKK+L DIKP P LWHED
Sbjct: 392 VVQSPINSLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHED 451
Query: 850 NTGRRFQGRDSRPQVPGAIHGNMLGEAAHRLLKNSLNIRSSGTSSGYFEQSQYRNVPGNN 671
N+ RR GRD RP+VPGAI G +LGEAAHRL+KN+LNI+S+G+SSG+FEQ RN PG
Sbjct: 452 NSSRRSHGRD-RPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPP 510
Query: 670 LQHRPRPAGPSGHGRNFNEDPNFYHG-YPNPRGMMPRPRLGFSPPNHLQGNRPNLKAQER 494
+ RPR GPSG + EDPN+ +G Y N +G RPR S N + G+R + + +R
Sbjct: 511 MFSRPRQVGPSGFETGYGEDPNYNYGHYNNYQGASSRPRYSHS-SNGMPGDRQSSRGNDR 569
Query: 493 YTYQDQYQDLRNGMSALTMDGGIRSR--------PYPVRMPQPQNLHGN----------- 371
+QY +LR GMSALT++ +R+R P P +P+ N+ GN
Sbjct: 570 VQLHEQYNNLRTGMSALTIEENVRNRSPDVLTPGPPPAMLPKMLNV-GNSTNQQNFTQAT 628
Query: 370 --LPSPPPTWINRGEDGNP----------GSYDNQVKKIYTIKTRVPQN 260
LPSPP WINR N G + QV+++Y KT V Q+
Sbjct: 629 DTLPSPPHKWINRSPSANTMHARQESFPGGVNEKQVRQMYLAKTPVSQS 677
>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 491 bits (1263), Expect = e-136
Identities = 257/469 (54%), Positives = 313/469 (66%), Gaps = 32/469 (6%)
Frame = -1
Query: 1570 CSWQWYYPYHYAPFASDLNDLADLEITFFLGEPFKPFDQLMGTLPAASSSALPDNYRKLM 1391
CSWQWYYPYHY+PFASDL +LADLEITFF+GEPFKPFDQLMGTLPAASS+ALP+ YR LM
Sbjct: 461 CSWQWYYPYHYSPFASDLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLM 520
Query: 1390 TDPSSPIIEFYPFDFDIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLEDTLTFEEHARNR 1211
TDPSSPI+EFYP DF+IDMNGKRF WQGVAKLPFIDE+KLL +TR+LE +LT EE RN
Sbjct: 521 TDPSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNS 580
Query: 1210 VLCDLLYVSPRNSLAPQIIAYYNFFYKMHPSQRWAWPIDVNASGGMNGYLWLCERNGCRL 1031
V+ D+LY + L+ QI +YY ++ P R W ID NASGGMNGYLWLCERN R
Sbjct: 581 VMLDMLYTHCTHPLSAQIFSYYQVASQLPPHARTCWVIDTNASGGMNGYLWLCERNVIRN 640
Query: 1030 VLPSPISGLGDIMDNHVLNATYINXXXXXXXXXXXKGVAMPKKILKPFDIKPLPVLWHED 851
V+ SPI+ L DI N VLN TY+N KG +PKK+L DIKP P LWHED
Sbjct: 641 VVQSPINSLPDIQCNQVLNVTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHED 700
Query: 850 NTGRRFQGRDSRPQVPGAIHGNMLGEAAHRLLKNSLNIRSSGTSSGYFEQSQYRNVPGNN 671
N+ RR GRD RP+VPGAI G +LGEAAHRL+KN+LNI+S+G+SSG+FEQ RN PG
Sbjct: 701 NSSRRSHGRD-RPRVPGAIAGPLLGEAAHRLVKNTLNIKSNGSSSGFFEQPYSRNFPGPP 759
Query: 670 LQHRPRPAGPSGHGRNFNEDPNFYHG-YPNPRGMMPRPRLGFSPPNHLQGNRPNLKAQER 494
+ RPR GPSG + EDPN+ +G Y N +G RPR S N + G+R + + +R
Sbjct: 760 MFSRPRQVGPSGFETGYGEDPNYNYGHYNNYQGASSRPRYSHS-SNGMPGDRQSSRGNDR 818
Query: 493 YTYQDQYQDLRNGMSALTMDGGIRSR--------PYPVRMPQPQNLHGN----------- 371
+QY +LR GMSALT++ +R+R P P +P+ N+ GN
Sbjct: 819 VQLHEQYNNLRTGMSALTIEENVRNRSPDVLTPGPPPAMLPKMLNV-GNSTNQQNFTQAT 877
Query: 370 --LPSPPPTWINRGEDGNP----------GSYDNQVKKIYTIKTRVPQN 260
LPSPP WINR N G + QV+++Y KT V Q+
Sbjct: 878 DTLPSPPHKWINRSPSANTMHARQESFPGGVNEKQVRQMYLAKTPVSQS 926