BLASTX nr result

ID: Atractylodes21_contig00011891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011891
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84719.1| unknown [Medicago truncatula]                          124   2e-32
ref|XP_002523640.1| WD-repeat protein, putative [Ricinus communi...   129   9e-30
ref|XP_003565062.1| PREDICTED: WD repeat-containing protein wat1...   127   6e-29
dbj|BAJ88427.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   6e-29
ref|XP_002283283.1| PREDICTED: protein LST8 homolog [Vitis vinif...   127   6e-29

>gb|ACJ84719.1| unknown [Medicago truncatula]
          Length = 314

 Score =  124 bits (312), Expect(2) = 2e-32
 Identities = 59/78 (75%), Positives = 66/78 (84%)
 Frame = -3

Query: 344 SSMALTQVTEVDTTVRSLTVMWDGSLVVVANNRGTCYV*RLMRGTQTMTSFEPLHKLQAH 165
           +S +   V EVDT VRSLTVMWDGSLVV ANN GTCYV RL+RGTQTMT+FEPLHKLQAH
Sbjct: 166 NSCSCELVPEVDTAVRSLTVMWDGSLVVAANNNGTCYVWRLLRGTQTMTNFEPLHKLQAH 225

Query: 164 DGYILKCLLLREFCEPQR 111
           +GYILKC+L  EFC+P R
Sbjct: 226 NGYILKCVLSPEFCDPHR 243



 Score = 40.8 bits (94), Expect(2) = 2e-32
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 61  NRYLATASSDSTVKIWNVDG 2
           +RYLATASSD TVKIWNVDG
Sbjct: 242 HRYLATASSDHTVKIWNVDG 261


>ref|XP_002523640.1| WD-repeat protein, putative [Ricinus communis]
           gi|223537092|gb|EEF38726.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 317

 Score =  129 bits (325), Expect(2) = 9e-30
 Identities = 62/78 (79%), Positives = 67/78 (85%)
 Frame = -3

Query: 344 SSMALTQVTEVDTTVRSLTVMWDGSLVVVANNRGTCYV*RLMRGTQTMTSFEPLHKLQAH 165
           +S +   V EVDT VRSLTVMWDGSLVV ANNRGTCYV RL+RGTQTMT+FEPLHKLQAH
Sbjct: 152 NSCSCELVPEVDTAVRSLTVMWDGSLVVAANNRGTCYVWRLLRGTQTMTNFEPLHKLQAH 211

Query: 164 DGYILKCLLLREFCEPQR 111
           DGYILKCLL  E+CEP R
Sbjct: 212 DGYILKCLLSPEYCEPNR 229



 Score = 26.6 bits (57), Expect(2) = 9e-30
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 88  CLFWND*C*NRYLATASSDSTVKIWNV 8
           C+F  D     YL TASSD+T ++W++
Sbjct: 264 CVFSVD---GAYLITASSDTTARLWSM 287


>ref|XP_003565062.1| PREDICTED: WD repeat-containing protein wat1-like [Brachypodium
           distachyon]
          Length = 316

 Score =  127 bits (319), Expect(2) = 6e-29
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = -3

Query: 344 SSMALTQVTEVDTTVRSLTVMWDGSLVVVANNRGTCYV*RLMRGTQTMTSFEPLHKLQAH 165
           +S +   V EVDT VRSLTVMWDGS+VV ANNRGTCYV RL++GTQT+TSFEPLHKLQAH
Sbjct: 151 NSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTITSFEPLHKLQAH 210

Query: 164 DGYILKCLLLREFCEPQR 111
           DGYILKCLL  EFC+P R
Sbjct: 211 DGYILKCLLSPEFCDPNR 228



 Score = 26.2 bits (56), Expect(2) = 6e-29
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 88  CLFWND*C*NRYLATASSDSTVKIWNV 8
           C+F  D     YL TASSD+T ++W +
Sbjct: 263 CVFSVD---GAYLITASSDTTARLWTM 286


>dbj|BAJ88427.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 316

 Score =  127 bits (319), Expect(2) = 6e-29
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = -3

Query: 344 SSMALTQVTEVDTTVRSLTVMWDGSLVVVANNRGTCYV*RLMRGTQTMTSFEPLHKLQAH 165
           +S +   V EVDT VRSLTVMWDGS+VV ANNRGTCYV RL++GTQT+TSFEPLHKLQAH
Sbjct: 151 NSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTITSFEPLHKLQAH 210

Query: 164 DGYILKCLLLREFCEPQR 111
           DGYILKCLL  EFC+P R
Sbjct: 211 DGYILKCLLSPEFCDPNR 228



 Score = 26.2 bits (56), Expect(2) = 6e-29
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 88  CLFWND*C*NRYLATASSDSTVKIWNV 8
           C+F  D     YL TASSD+T ++W +
Sbjct: 263 CVFSVD---GAYLITASSDTTARLWTM 286


>ref|XP_002283283.1| PREDICTED: protein LST8 homolog [Vitis vinifera]
           gi|297739698|emb|CBI29880.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score =  127 bits (318), Expect(2) = 6e-29
 Identities = 61/78 (78%), Positives = 65/78 (83%)
 Frame = -3

Query: 344 SSMALTQVTEVDTTVRSLTVMWDGSLVVVANNRGTCYV*RLMRGTQTMTSFEPLHKLQAH 165
           +S +   V EVDT VRSLTVMWDGSLVV ANN GTCYV RL+RG QTMT+FEPLHKLQAH
Sbjct: 151 NSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLLRGNQTMTNFEPLHKLQAH 210

Query: 164 DGYILKCLLLREFCEPQR 111
           DGYILKCLL  EFCEP R
Sbjct: 211 DGYILKCLLSPEFCEPHR 228



 Score = 26.6 bits (57), Expect(2) = 6e-29
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 88  CLFWND*C*NRYLATASSDSTVKIWNV 8
           C+F  D     YL TASSD+T ++W++
Sbjct: 263 CVFSVD---GAYLITASSDTTARLWSM 286


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