BLASTX nr result

ID: Atractylodes21_contig00011856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011856
         (1565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234089.1| geranyl pyrophosphate synthase [Solanum lyco...   548   e-153
gb|AEZ55677.1| geranyl diphosphate synthase [Salvia miltiorrhiza]     539   e-151
ref|XP_004134571.1| PREDICTED: solanesyl diphosphate synthase 3,...   539   e-151
gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus]   533   e-149
ref|XP_002268229.2| PREDICTED: decaprenyl-diphosphate synthase s...   532   e-148

>ref|NP_001234089.1| geranyl pyrophosphate synthase [Solanum lycopersicum]
            gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase
            [Solanum lycopersicum]
          Length = 415

 Score =  548 bits (1413), Expect = e-153
 Identities = 291/421 (69%), Positives = 336/421 (79%), Gaps = 1/421 (0%)
 Frame = +1

Query: 208  MFFYRGISRISRTASSYNRSRWLYCSTPHQQLSHSSRFRSPMESSQEVLGCRVIYXXXXX 387
            M F +G+++ISR  + ++R RWL+   P  QL  S+    P     +VLGCRVI+     
Sbjct: 1    MIFSKGLAQISR--NRFSRCRWLFSLRPIPQLHQSNHIHDP----PKVLGCRVIHSWVSN 54

Query: 388  XXXXXGPQPLNQRSSV-EDQVDPFSLVADELSVVADRLRSMVVAEVPKLASAAEYFFKMG 564
                 G Q   Q ++V E+QVDPFSLVADELS++ +RLRSMVVAEVPKLASAAEYFFK+G
Sbjct: 55   ALSGIGQQIHQQSTAVAEEQVDPFSLVADELSLLTNRLRSMVVAEVPKLASAAEYFFKLG 114

Query: 565  VEGKRFRPTVILLMATALNIQISKPASERVADMFSTDLRMRQQSIAEITEMIHVASLLHD 744
            VEGKRFRPTV+LLMATALN+QI + A +   D FS DLR RQQ IAEITEMIHVASLLHD
Sbjct: 115  VEGKRFRPTVLLLMATALNVQIPRSAPQVDVDSFSGDLRTRQQCIAEITEMIHVASLLHD 174

Query: 745  DVLDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRACIALASLENTEVVSLIATAVEHLVT 924
            DVLDDADTRRG+GSLNFVMGNKLAVLAGDFLLSRAC+ALASL+NTEVV L+AT VEHLVT
Sbjct: 175  DVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVCLLATVVEHLVT 234

Query: 925  GETMQMSTSTEQRSSMDYYLQKTYYKTASLISNGCKSIALLTGQTAEVSMLAYEYGKNLG 1104
            GETMQM+TS+++R SM+YY+QKTYYKTASLISN CK+IALL G +AEVS+LA++YGKNLG
Sbjct: 235  GETMQMTTSSDERCSMEYYMQKTYYKTASLISNSCKAIALLAGHSAEVSVLAFDYGKNLG 294

Query: 1105 LAFQLIDDVLDFXXXXXXXXXXXXXDIHHGIVTAPILYAMEEFPELRSVVDRGLDDPADV 1284
            LAFQLIDDVLDF             DI HGIVTAPILYAMEEFP+LR++VDRG DDP +V
Sbjct: 295  LAFQLIDDVLDFTGTSATLGKGSLSDIRHGIVTAPILYAMEEFPQLRTLVDRGFDDPVNV 354

Query: 1285 ALALEYLGKSHGIQRTRELXXXXXXXXXXXIDSLPENDDEDVQRSRRALVELTHRVINRT 1464
             +AL+YLGKS GIQRTREL           IDSLPE+DDE+VQRSRRALVELTHRVI RT
Sbjct: 355  EIALDYLGKSRGIQRTRELARKHASLASAAIDSLPESDDEEVQRSRRALVELTHRVITRT 414

Query: 1465 K 1467
            K
Sbjct: 415  K 415


>gb|AEZ55677.1| geranyl diphosphate synthase [Salvia miltiorrhiza]
          Length = 424

 Score =  539 bits (1389), Expect = e-151
 Identities = 288/426 (67%), Positives = 334/426 (78%), Gaps = 6/426 (1%)
 Frame = +1

Query: 208  MFFYRGISRISRTASSYNRSRWLYCS-----TPHQQLSHSSRFRSPMESSQEVLGCRVIY 372
            M   RG++R++R  S Y R RW+Y S     +   QL HSS FR+P++SS+EVLGCRVIY
Sbjct: 1    MISVRGLARLAR--SGYARRRWVYSSLGCSGSAPLQLEHSSHFRNPIQSSREVLGCRVIY 58

Query: 373  XXXXXXXXXXGPQP-LNQRSSVEDQVDPFSLVADELSVVADRLRSMVVAEVPKLASAAEY 549
                      G Q  L   S+VE+Q+DPFSLVADELS++ADRLRSMVVAEVPKLASAAEY
Sbjct: 59   SWVSNAISTVGQQVHLQSSSAVEEQLDPFSLVADELSILADRLRSMVVAEVPKLASAAEY 118

Query: 550  FFKMGVEGKRFRPTVILLMATALNIQISKPASERVADMFSTDLRMRQQSIAEITEMIHVA 729
            FFK GVEGKRFRPTV+LLMATAL++ I++  SE   +  ST+LR RQQ +AEITEMIHVA
Sbjct: 119  FFKFGVEGKRFRPTVLLLMATALDLPIARQTSEVAVNTLSTELRTRQQCVAEITEMIHVA 178

Query: 730  SLLHDDVLDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRACIALASLENTEVVSLIATAV 909
            SLLHDDVLDDADTRRG+GSLN+VMGNKLAVLAGDFLLSRAC+ALASL+NTEVV+LIA  V
Sbjct: 179  SLLHDDVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLIAQVV 238

Query: 910  EHLVTGETMQMSTSTEQRSSMDYYLQKTYYKTASLISNGCKSIALLTGQTAEVSMLAYEY 1089
            EHLVTGETMQM+T++EQR SM+YY++KTYYKTASLI N CKSIAL+ GQTAEVS LAYEY
Sbjct: 239  EHLVTGETMQMTTTSEQRCSMEYYMEKTYYKTASLICNSCKSIALIAGQTAEVSNLAYEY 298

Query: 1090 GKNLGLAFQLIDDVLDFXXXXXXXXXXXXXDIHHGIVTAPILYAMEEFPELRSVVDRGLD 1269
            GKNLGLAFQ+IDDVLDF             DI HGIVTAPIL+A+EE+PELR +VD+G +
Sbjct: 299  GKNLGLAFQIIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAIEEYPELRKIVDQGFE 358

Query: 1270 DPADVALALEYLGKSHGIQRTRELXXXXXXXXXXXIDSLPENDDEDVQRSRRALVELTHR 1449
              ++V  ALE L KS GIQR REL           ID+LPEN+DE VQRS RALVELTH 
Sbjct: 359  KSSNVDRALEILSKSSGIQRARELAAKHARLASAAIDALPENEDEVVQRSMRALVELTHI 418

Query: 1450 VINRTK 1467
            VI RTK
Sbjct: 419  VITRTK 424


>ref|XP_004134571.1| PREDICTED: solanesyl diphosphate synthase 3,
            chloroplastic/mitochondrial-like [Cucumis sativus]
            gi|449490572|ref|XP_004158644.1| PREDICTED: solanesyl
            diphosphate synthase 3, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 423

 Score =  539 bits (1388), Expect = e-151
 Identities = 288/431 (66%), Positives = 334/431 (77%), Gaps = 11/431 (2%)
 Frame = +1

Query: 208  MFFYRGISRISRTASSYNRSRWLYCSTPHQQLSHSSRFRS----------PMESSQEVLG 357
            M FYRG+SRISR + + +  RW         LSH S  R           P ES ++ LG
Sbjct: 1    MLFYRGLSRISRISRNSSCCRWF--------LSHRSDTRPVLIPNVPSLHPSESDRQALG 52

Query: 358  CRVIYXXXXXXXXXXGPQPLNQRSSV-EDQVDPFSLVADELSVVADRLRSMVVAEVPKLA 534
            CR I           G    +Q SSV E+Q+DPFSLVADELS++A+RLR+MVVAEVPKLA
Sbjct: 53   CREIMYLASPAFHGLGRHIHHQSSSVVEEQLDPFSLVADELSLLANRLRAMVVAEVPKLA 112

Query: 535  SAAEYFFKMGVEGKRFRPTVILLMATALNIQISKPASERVADMFSTDLRMRQQSIAEITE 714
            SAAEYFFK+GVEGKRFRPTV+LLMATALN+ ISKP    V D  + DLR RQQ +AEITE
Sbjct: 113  SAAEYFFKLGVEGKRFRPTVLLLMATALNMPISKPLPHLVEDNLTMDLRTRQQCVAEITE 172

Query: 715  MIHVASLLHDDVLDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRACIALASLENTEVVSL 894
            MIHVASLLHDDVLDDADTRRG+GSLNFVMGNK++VLAGDFLLSRAC+ALASL+NTEVVSL
Sbjct: 173  MIHVASLLHDDVLDDADTRRGIGSLNFVMGNKISVLAGDFLLSRACVALASLKNTEVVSL 232

Query: 895  IATAVEHLVTGETMQMSTSTEQRSSMDYYLQKTYYKTASLISNGCKSIALLTGQTAEVSM 1074
            IA  VEHLVTGETMQM+T+++QR SM+YY+QKTYYKTASLISN CKS+ALL GQTAEV+M
Sbjct: 233  IAQVVEHLVTGETMQMTTTSDQRYSMEYYMQKTYYKTASLISNSCKSVALLAGQTAEVAM 292

Query: 1075 LAYEYGKNLGLAFQLIDDVLDFXXXXXXXXXXXXXDIHHGIVTAPILYAMEEFPELRSVV 1254
            LAYEYGKNLGLA+QLIDDVLDF             DIHHGI+TAP+L+AMEEFP+LR+VV
Sbjct: 293  LAYEYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIHHGIITAPLLFAMEEFPQLRTVV 352

Query: 1255 DRGLDDPADVALALEYLGKSHGIQRTRELXXXXXXXXXXXIDSLPENDDEDVQRSRRALV 1434
            +RG D+  +V +A+EYLGKSHGIQR REL           IDSLPEN+DEDV++SRRALV
Sbjct: 353  ERGFDNTENVDIAMEYLGKSHGIQRARELAAMHANLAAEAIDSLPENNDEDVRKSRRALV 412

Query: 1435 ELTHRVINRTK 1467
            +LT RVI RTK
Sbjct: 413  DLTQRVITRTK 423


>gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus]
          Length = 420

 Score =  533 bits (1374), Expect = e-149
 Identities = 290/422 (68%), Positives = 333/422 (78%), Gaps = 2/422 (0%)
 Frame = +1

Query: 208  MFFYRGISRISRTASSYNRSRWLY-CSTPHQQLSHSSRFRSPMESSQEVLGCRVIYXXXX 384
            M F RG+ RI+RT  S NRSR LY   +   +L  S +FRSP+ SSQ+V G RVIY    
Sbjct: 1    MLFSRGLYRIART--SLNRSRLLYPLQSQSPELLQSFQFRSPIGSSQKVSGFRVIYSWVS 58

Query: 385  XXXXXXGPQPLNQRSSV-EDQVDPFSLVADELSVVADRLRSMVVAEVPKLASAAEYFFKM 561
                  G Q   Q +SV E+ +DPFSLVADELS++A+RLRSMVVAEVPKLASAAEYFFK+
Sbjct: 59   SALANVGQQVQRQSNSVAEEPLDPFSLVADELSILANRLRSMVVAEVPKLASAAEYFFKL 118

Query: 562  GVEGKRFRPTVILLMATALNIQISKPASERVADMFSTDLRMRQQSIAEITEMIHVASLLH 741
            GVEGKRFRPTV+LLMATA++  IS+   +   D  ST+LR+RQQ+IAEIT+MIHVASLLH
Sbjct: 119  GVEGKRFRPTVLLLMATAIDAPISRTPPDTSLDTLSTELRLRQQTIAEITKMIHVASLLH 178

Query: 742  DDVLDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRACIALASLENTEVVSLIATAVEHLV 921
            DDVLDDA+TRRG+GSLNFVMGNKLAVLAGDFLLSRAC+ALASL+NTEVVSL+AT VEHLV
Sbjct: 179  DDVLDDAETRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLV 238

Query: 922  TGETMQMSTSTEQRSSMDYYLQKTYYKTASLISNGCKSIALLTGQTAEVSMLAYEYGKNL 1101
            TGETMQM+T+++QR SM+YY+QKTYY TASLISN CK+IALL GQT+EV+MLAYEYGKNL
Sbjct: 239  TGETMQMTTTSDQRCSMEYYMQKTYYMTASLISNSCKAIALLAGQTSEVAMLAYEYGKNL 298

Query: 1102 GLAFQLIDDVLDFXXXXXXXXXXXXXDIHHGIVTAPILYAMEEFPELRSVVDRGLDDPAD 1281
            GLAFQLIDDVLDF             DI HGIVTAPIL+A+EEFPELR+VVD G ++P +
Sbjct: 299  GLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAIEEFPELRAVVDEGFENPYN 358

Query: 1282 VALALEYLGKSHGIQRTRELXXXXXXXXXXXIDSLPENDDEDVQRSRRALVELTHRVINR 1461
            V LAL YLGKS GIQRTREL           IDSLP  DDE V RSRRALVELT RVI R
Sbjct: 359  VDLALHYLGKSRGIQRTRELAIKHANLASDAIDSLPVTDDEHVLRSRRALVELTQRVITR 418

Query: 1462 TK 1467
             K
Sbjct: 419  RK 420


>ref|XP_002268229.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Vitis vinifera]
            gi|296090181|emb|CBI40000.3| unnamed protein product
            [Vitis vinifera]
          Length = 422

 Score =  532 bits (1370), Expect = e-148
 Identities = 286/424 (67%), Positives = 332/424 (78%), Gaps = 4/424 (0%)
 Frame = +1

Query: 208  MFFYRGISRISRTASSYNR-SRWL--YCSTPHQQLSHSSRFRSPMESSQEVLGCRVIYXX 378
            M F RG SR+ +  +++NR S+WL  +   PH Q  H       +  +  VLGCR  Y  
Sbjct: 1    MLFSRGFSRLPK--ATFNRCSKWLLSHHRHPHPQDHHHRHRHFVLSPTHRVLGCRETYSW 58

Query: 379  XXXXXXXXGPQPLNQRSSV-EDQVDPFSLVADELSVVADRLRSMVVAEVPKLASAAEYFF 555
                      Q   + SS+ E+Q+DPFSLVADELS++ADRLRSMVVAEVPKLASAAEYFF
Sbjct: 59   GSPFLSGVRHQIHQESSSLAEEQLDPFSLVADELSLLADRLRSMVVAEVPKLASAAEYFF 118

Query: 556  KMGVEGKRFRPTVILLMATALNIQISKPASERVADMFSTDLRMRQQSIAEITEMIHVASL 735
            KMGVEGKRFRPTV+LLMATALN+ + +PA   V +  ST+LR RQQ IAEITEMIHVASL
Sbjct: 119  KMGVEGKRFRPTVLLLMATALNVPLPRPALAEVPETLSTELRTRQQCIAEITEMIHVASL 178

Query: 736  LHDDVLDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRACIALASLENTEVVSLIATAVEH 915
            LHDDVLDDA+TRRG+GSLN +MGNK+AVLAGDFLLSRAC+ALASL+NTEVVSL+AT VEH
Sbjct: 179  LHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEH 238

Query: 916  LVTGETMQMSTSTEQRSSMDYYLQKTYYKTASLISNGCKSIALLTGQTAEVSMLAYEYGK 1095
            LVTGETMQM++++EQR SM+YYLQKTYYKTASLISN CK+IALL GQTAEVSMLA+EYGK
Sbjct: 239  LVTGETMQMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALLAGQTAEVSMLAFEYGK 298

Query: 1096 NLGLAFQLIDDVLDFXXXXXXXXXXXXXDIHHGIVTAPILYAMEEFPELRSVVDRGLDDP 1275
            NLGLAFQLIDDVLDF             DI HGI+TAPIL+A+EEFP+L +VV RGLD+P
Sbjct: 299  NLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAIEEFPQLDAVVKRGLDNP 358

Query: 1276 ADVALALEYLGKSHGIQRTRELXXXXXXXXXXXIDSLPENDDEDVQRSRRALVELTHRVI 1455
            AD+ LAL+YLGKS GIQRTREL           IDSLPE+ DEDV RSRRAL++LTHRVI
Sbjct: 359  ADIDLALDYLGKSRGIQRTRELAMKHANLAAEAIDSLPESGDEDVLRSRRALIDLTHRVI 418

Query: 1456 NRTK 1467
             RTK
Sbjct: 419  TRTK 422


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