BLASTX nr result

ID: Atractylodes21_contig00011790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011790
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   122   1e-44
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   122   1e-44
ref|XP_003630014.1| Lsd1-like protein [Medicago truncatula] gi|3...   122   1e-44
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               122   4e-44
gb|AFK40862.1| unknown [Medicago truncatula]                          120   4e-44

>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  122 bits (305), Expect(2) = 1e-44
 Identities = 59/77 (76%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = -2

Query: 265 VKCAVCHYITNVNMSNGRVPVPV-RPNGTATSGSMPSVSTATPHSHNQTVVVENPMSVDE 89
           VKCAVCHYITN+NMSNGR+P+P  RP+GT  SG +PS ST+ P S +QTVVVENPMSVD 
Sbjct: 147 VKCAVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDS 206

Query: 88  SGKLVSNVVVGVTTEKK 38
           SGKLVSNVVVGVTT+KK
Sbjct: 207 SGKLVSNVVVGVTTDKK 223



 Score = 82.8 bits (203), Expect(2) = 1e-44
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -3

Query: 456 GATSVRCSCCHTVNLAPVSNQLAQVNCGNCRIMLMYPFGAPS 331
           GATSVRCSCCHTVNLAPVSNQ+A V CGNCR  LMYP+GAPS
Sbjct: 105 GATSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPS 146


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  122 bits (305), Expect(2) = 1e-44
 Identities = 59/77 (76%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = -2

Query: 265 VKCAVCHYITNVNMSNGRVPVPV-RPNGTATSGSMPSVSTATPHSHNQTVVVENPMSVDE 89
           VKCAVCHYITN+NMSNGR+P+P  RP+GT  SG +PS ST+ P S +QTVVVENPMSVD 
Sbjct: 135 VKCAVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDS 194

Query: 88  SGKLVSNVVVGVTTEKK 38
           SGKLVSNVVVGVTT+KK
Sbjct: 195 SGKLVSNVVVGVTTDKK 211



 Score = 82.8 bits (203), Expect(2) = 1e-44
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -3

Query: 456 GATSVRCSCCHTVNLAPVSNQLAQVNCGNCRIMLMYPFGAPS 331
           GATSVRCSCCHTVNLAPVSNQ+A V CGNCR  LMYP+GAPS
Sbjct: 93  GATSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPS 134


>ref|XP_003630014.1| Lsd1-like protein [Medicago truncatula] gi|355524036|gb|AET04490.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 123

 Score =  122 bits (305), Expect(2) = 1e-44
 Identities = 59/77 (76%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = -2

Query: 265 VKCAVCHYITNVNMSNGRVPVPV-RPNGTATSGSMPSVSTATPHSHNQTVVVENPMSVDE 89
           VKCAVCHYITN+NMSNGR+P+P  RP+GT  SG +PS ST+ P S +QTVVVENPMSVD 
Sbjct: 47  VKCAVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDS 106

Query: 88  SGKLVSNVVVGVTTEKK 38
           SGKLVSNVVVGVTT+KK
Sbjct: 107 SGKLVSNVVVGVTTDKK 123



 Score = 82.8 bits (203), Expect(2) = 1e-44
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -3

Query: 456 GATSVRCSCCHTVNLAPVSNQLAQVNCGNCRIMLMYPFGAPS 331
           GATSVRCSCCHTVNLAPVSNQ+A V CGNCR  LMYP+GAPS
Sbjct: 5   GATSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPS 46


>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  122 bits (307), Expect(2) = 4e-44
 Identities = 60/77 (77%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
 Frame = -2

Query: 265 VKCAVCHYITNVNMSNGRVPVPV-RPNGTATSGSMPSVSTATPHSHNQTVVVENPMSVDE 89
           VKCAVCHYITN+NMSNGRVPVP  RP GT   G++PS ST+ P S  QTVVVENPMSVD 
Sbjct: 100 VKCAVCHYITNINMSNGRVPVPANRPQGTTNLGTLPSTSTSMPQSQGQTVVVENPMSVDS 159

Query: 88  SGKLVSNVVVGVTTEKK 38
           SGKLVSNVVVGVTT+KK
Sbjct: 160 SGKLVSNVVVGVTTDKK 176



 Score = 80.5 bits (197), Expect(2) = 4e-44
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 456 GATSVRCSCCHTVNLAPVSNQLAQVNCGNCRIMLMYPFGAPS 331
           GATSVRCSCCHTVNLAPVSNQ+A V C NCR  LMYP+GAPS
Sbjct: 58  GATSVRCSCCHTVNLAPVSNQVAHVPCANCRTTLMYPYGAPS 99


>gb|AFK40862.1| unknown [Medicago truncatula]
          Length = 176

 Score =  120 bits (301), Expect(2) = 4e-44
 Identities = 58/77 (75%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
 Frame = -2

Query: 265 VKCAVCHYITNVNMSNGRVPVPV-RPNGTATSGSMPSVSTATPHSHNQTVVVENPMSVDE 89
           VKC VCHYITN+NMSNGR+P+P  RP+GT  SG +PS ST+ P S +QTVVVENPMSVD 
Sbjct: 100 VKCVVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDS 159

Query: 88  SGKLVSNVVVGVTTEKK 38
           SGKLVSNVVVGVTT+KK
Sbjct: 160 SGKLVSNVVVGVTTDKK 176



 Score = 82.8 bits (203), Expect(2) = 4e-44
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -3

Query: 456 GATSVRCSCCHTVNLAPVSNQLAQVNCGNCRIMLMYPFGAPS 331
           GATSVRCSCCHTVNLAPVSNQ+A V CGNCR  LMYP+GAPS
Sbjct: 58  GATSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPS 99


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