BLASTX nr result

ID: Atractylodes21_contig00011754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011754
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83485.2| hypothetical protein (mitochondrion) [Nicotiana ...   263   3e-68
ref|YP_173421.1| hypothetical protein NitaMp079 [Nicotiana tabacum]   258   1e-66
ref|YP_004237279.1| ribosomal protein S1 (mitochondrion) [Ricinu...   254   2e-65
ref|YP_003587379.2| ribosomal protein S1 [Cucurbita pepo] gi|313...   252   8e-65
emb|CAN65168.1| hypothetical protein VITISV_029402 [Vitis vinifera]   252   1e-64

>dbj|BAD83485.2| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 216

 Score =  263 bits (673), Expect = 3e-68
 Identities = 135/215 (62%), Positives = 173/215 (80%), Gaps = 2/215 (0%)
 Frame = +2

Query: 26  HRSKR--KQLLTMTIYMSRLFPKSNSSFLLSTGKALKSQVSRFKDDIYLVDAGIGTPKMT 199
           +R++R  K+ L M+IY+SRLFP+SNSSF L +G AL+S+V R +++++LVDAG+GTP++ 
Sbjct: 5   NRTRRGGKKKLMMSIYLSRLFPRSNSSFFLCSGNALQSEVLRLREEMFLVDAGLGTPRIC 64

Query: 200 MPDELRGVPISRGVTRFENKVGFLDGTEKELPVKTQILERFFMDLVAGEPEMKKRATAKF 379
           M DEL GVPI+R  TRFENKVGFLD    E  +K QILERFF+DLVAGE  +K+RA A+F
Sbjct: 65  MQDELTGVPINRA-TRFENKVGFLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARF 123

Query: 380 NDLIDSTDAVAGEPAILLPRRFRQNQALKELQKIWQSNKKVRGFLLEKVRGGYSVAIAGY 559
           NDL+ STD VAGEP +LLPRRFRQN+A  EL KIW++N KV+GF++EKV+GGYSVAIAG+
Sbjct: 124 NDLVGSTDVVAGEPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGF 183

Query: 560 IAFLPFRPYVGRRKLSNDRYTIETINSKTKKITVF 664
           I FLPFR    R+++SNDR+TIE IN K   I VF
Sbjct: 184 ITFLPFRR--RRKRISNDRFTIENINPKKTNIVVF 216


>ref|YP_173421.1| hypothetical protein NitaMp079 [Nicotiana tabacum]
          Length = 216

 Score =  258 bits (660), Expect = 1e-66
 Identities = 133/215 (61%), Positives = 171/215 (79%), Gaps = 2/215 (0%)
 Frame = +2

Query: 26  HRSKR--KQLLTMTIYMSRLFPKSNSSFLLSTGKALKSQVSRFKDDIYLVDAGIGTPKMT 199
           +R++R  K+ L M+IY+SR FP+SNSSF L +G AL+S+V R +++++LVDAG+GTP++ 
Sbjct: 5   NRTRRGGKKKLMMSIYLSRSFPRSNSSFFLCSGNALQSEVLRLREEMFLVDAGLGTPRIC 64

Query: 200 MPDELRGVPISRGVTRFENKVGFLDGTEKELPVKTQILERFFMDLVAGEPEMKKRATAKF 379
           M DE  GVPI+R  TRFENKVGFLD    E  +K QILERFF+DLVAGE  +K+RA A+F
Sbjct: 65  MQDEPTGVPINRA-TRFENKVGFLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARF 123

Query: 380 NDLIDSTDAVAGEPAILLPRRFRQNQALKELQKIWQSNKKVRGFLLEKVRGGYSVAIAGY 559
           NDL+ STD VAGEP +LLPRRFRQN+A  EL KIW++N KV+GF++EKV+GGYSVAIAG+
Sbjct: 124 NDLVGSTDVVAGEPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGF 183

Query: 560 IAFLPFRPYVGRRKLSNDRYTIETINSKTKKITVF 664
           I FLPFR    R+++SNDR+TIE IN K   I VF
Sbjct: 184 ITFLPFRR--RRKRISNDRFTIENINPKKTNIVVF 216


>ref|YP_004237279.1| ribosomal protein S1 (mitochondrion) [Ricinus communis]
           gi|322394286|gb|ADW96043.1| ribosomal protein S1
           (mitochondrion) [Ricinus communis]
          Length = 201

 Score =  254 bits (649), Expect = 2e-65
 Identities = 127/203 (62%), Positives = 164/203 (80%)
 Frame = +2

Query: 56  MTIYMSRLFPKSNSSFLLSTGKALKSQVSRFKDDIYLVDAGIGTPKMTMPDELRGVPISR 235
           M+IY+SR FP+SNSSF L +G AL+S+V R +++++LV+AG+GTP++ M DE  GVPI+R
Sbjct: 1   MSIYLSRSFPRSNSSFFLCSGNALQSEVLRLREEMFLVNAGLGTPRICMQDEPTGVPINR 60

Query: 236 GVTRFENKVGFLDGTEKELPVKTQILERFFMDLVAGEPEMKKRATAKFNDLIDSTDAVAG 415
             TRFENKVG L     E  +K QILERFF+DLVAGE  +K+RA A+FNDL+ STD VAG
Sbjct: 61  A-TRFENKVGSLGVVAGESMIKEQILERFFIDLVAGESMIKERAAARFNDLVGSTDVVAG 119

Query: 416 EPAILLPRRFRQNQALKELQKIWQSNKKVRGFLLEKVRGGYSVAIAGYIAFLPFRPYVGR 595
           EP +LLPRRFRQN+A  EL KIW++N KV+GF++EKV+GGYSVAIAG+I FLPFRP + R
Sbjct: 120 EPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLI-R 178

Query: 596 RKLSNDRYTIETINSKTKKITVF 664
           +++SNDR+TIE+IN K   I VF
Sbjct: 179 QRISNDRFTIESINPKRTNIVVF 201


>ref|YP_003587379.2| ribosomal protein S1 [Cucurbita pepo] gi|313354146|gb|ACV96689.2|
           ribosomal protein S1 [Cucurbita pepo]
          Length = 201

 Score =  252 bits (644), Expect = 8e-65
 Identities = 128/203 (63%), Positives = 160/203 (78%)
 Frame = +2

Query: 56  MTIYMSRLFPKSNSSFLLSTGKALKSQVSRFKDDIYLVDAGIGTPKMTMPDELRGVPISR 235
           M+IY+SR FP+SNSSF L +G AL+S V R +++++LVDAG GTP++ M DE  GVPI+R
Sbjct: 1   MSIYLSRSFPRSNSSFFLRSGNALQSSVLRLREEMFLVDAGPGTPRICMQDEPTGVPINR 60

Query: 236 GVTRFENKVGFLDGTEKELPVKTQILERFFMDLVAGEPEMKKRATAKFNDLIDSTDAVAG 415
              RFENKVGFLD    E  +K  ILERFF+DLVAGE  +K+RA A FNDL+ STD VAG
Sbjct: 61  AA-RFENKVGFLDLVAGESLIKEPILERFFIDLVAGESLIKERAAAGFNDLVGSTDVVAG 119

Query: 416 EPAILLPRRFRQNQALKELQKIWQSNKKVRGFLLEKVRGGYSVAIAGYIAFLPFRPYVGR 595
           EP  +LPRRFRQN+A  EL KIWQ+N KV+GF++EKV+GGYSVAIAG+I FLPFRP + +
Sbjct: 120 EPLFILPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQ 179

Query: 596 RKLSNDRYTIETINSKTKKITVF 664
           R +SN+R+TIE+IN KT  I VF
Sbjct: 180 R-ISNERFTIESINPKTTNIVVF 201


>emb|CAN65168.1| hypothetical protein VITISV_029402 [Vitis vinifera]
          Length = 217

 Score =  252 bits (643), Expect = 1e-64
 Identities = 130/215 (60%), Positives = 167/215 (77%), Gaps = 2/215 (0%)
 Frame = +2

Query: 26  HRSKRKQL--LTMTIYMSRLFPKSNSSFLLSTGKALKSQVSRFKDDIYLVDAGIGTPKMT 199
           +R +RK++  L M+IY+SR FP+SNSSF L +G A +S V R +++++LVDAG GTP++ 
Sbjct: 5   NRKRRKKIKKLMMSIYLSRSFPRSNSSFFLCSGNASQSSVLRLREEMFLVDAGPGTPRIC 64

Query: 200 MPDELRGVPISRGVTRFENKVGFLDGTEKELPVKTQILERFFMDLVAGEPEMKKRATAKF 379
           M DE  GVPI+R  TRFENKVG LD    E  +K QI ERFF+DLVAGE  +K+RA A+F
Sbjct: 65  MQDEPTGVPINRA-TRFENKVGSLDLVAGESLIKEQIFERFFIDLVAGESLIKERAAARF 123

Query: 380 NDLIDSTDAVAGEPAILLPRRFRQNQALKELQKIWQSNKKVRGFLLEKVRGGYSVAIAGY 559
           NDL+ STD VAGEP +LLPRR RQN+A  EL KIW++N KV+GF++EKV+GGYSVAIAG+
Sbjct: 124 NDLVGSTDVVAGEPLLLLPRRLRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGF 183

Query: 560 IAFLPFRPYVGRRKLSNDRYTIETINSKTKKITVF 664
           I FLPFRP   R+++SNDR+TIE+IN K   I VF
Sbjct: 184 ITFLPFRPRT-RKRISNDRFTIESINPKRTNIVVF 217


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