BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011732
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36876.3| unnamed protein product [Vitis vinifera]              184   8e-45
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   184   8e-45
emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]     181   7e-44
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...   180   1e-43
ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, p...   179   2e-43

>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/135 (71%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
 Frame = -3

Query: 402 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 223
           LNEK KL+ELKKSL AVFSQFGKI+E+LAFKTLKHKGQAWVVFE+VSSAT+AL+QMQGFP
Sbjct: 8   LNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFP 67

Query: 222 FYDKPMRIQYAKTKSDVIAKSDGTFVP-XXXXXXXXXXXXXXXGQHDANQAAVGVNPSXX 46
           FYDKPMRIQYAKTKSDVIAK+DGTFVP                 QHDANQA VGVNP+  
Sbjct: 68  FYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVGVNPAYG 127

Query: 45  XXXXXXXPLSQIPYM 1
                  PLSQIPY+
Sbjct: 128 GAYGAAPPLSQIPYL 142


>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/135 (71%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
 Frame = -3

Query: 402 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 223
           LNEK KL+ELKKSL AVFSQFGKI+E+LAFKTLKHKGQAWVVFE+VSSAT+AL+QMQGFP
Sbjct: 21  LNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFP 80

Query: 222 FYDKPMRIQYAKTKSDVIAKSDGTFVP-XXXXXXXXXXXXXXXGQHDANQAAVGVNPSXX 46
           FYDKPMRIQYAKTKSDVIAK+DGTFVP                 QHDANQA VGVNP+  
Sbjct: 81  FYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVGVNPAYG 140

Query: 45  XXXXXXXPLSQIPYM 1
                  PLSQIPY+
Sbjct: 141 GAYGAAPPLSQIPYL 155


>emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
          Length = 253

 Score =  181 bits (458), Expect = 7e-44
 Identities = 91/134 (67%), Positives = 104/134 (77%)
 Frame = -3

Query: 402 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 223
           LNEK KL+ELKKS+ AVFSQFGKILE+LAFKTLKHKGQAWVVFE+VSSA++AL+QMQGFP
Sbjct: 30  LNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFP 89

Query: 222 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXGQHDANQAAVGVNPSXXX 43
           FYDKPMRIQYAKTKSDV+AK+DGTFVP                Q D+NQA +G+NP+   
Sbjct: 90  FYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQDSNQAGMGLNPAYAG 149

Query: 42  XXXXXXPLSQIPYM 1
                 P SQIPYM
Sbjct: 150 AYGAAPPFSQIPYM 163


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score =  180 bits (456), Expect = 1e-43
 Identities = 92/133 (69%), Positives = 103/133 (77%)
 Frame = -3

Query: 402 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 223
           LNEK KL+ELKKSL AVFSQFGKILE+LAFKTLKHKGQAWVVFE+VSSAT+AL+QMQGFP
Sbjct: 22  LNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFP 81

Query: 222 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXGQHDANQAAVGVNPSXXX 43
           FYDKPMRIQYAKTKSD+IAKSDG+FVP                QHDANQA +G+NP+   
Sbjct: 82  FYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEEKGRKKKEQHDANQAGMGLNPAFAG 141

Query: 42  XXXXXXPLSQIPY 4
                   SQ+PY
Sbjct: 142 AYGATAH-SQVPY 153


>ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
           communis] gi|223537662|gb|EEF39285.1| small nuclear
           ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
          Length = 254

 Score =  179 bits (455), Expect = 2e-43
 Identities = 92/133 (69%), Positives = 101/133 (75%)
 Frame = -3

Query: 402 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 223
           LNEK KLDELKKSL AVFSQFGKI+EILAFKTLKHKGQAWVVFEDV SAT+A++QMQ FP
Sbjct: 32  LNEKIKLDELKKSLHAVFSQFGKIIEILAFKTLKHKGQAWVVFEDVQSATNAIRQMQSFP 91

Query: 222 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXGQHDANQAAVGVNPSXXX 43
           FYDKPMRI +AKTKSDVIAK+DGTFVP                QHDANQA +G+ P+   
Sbjct: 92  FYDKPMRIHFAKTKSDVIAKADGTFVPREKRKRHEEKGKRKKEQHDANQAGIGMAPAYAG 151

Query: 42  XXXXXXPLSQIPY 4
                 PLSQIPY
Sbjct: 152 AYGATPPLSQIPY 164