BLASTX nr result

ID: Atractylodes21_contig00011681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011681
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
gb|AEQ94165.1| TPR-like domain containing protein [Elaeis guinee...   153   2e-35
ref|XP_002526972.1| pentatricopeptide repeat-containing protein,...   152   3e-35
ref|XP_004141120.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
gb|EEC78508.1| hypothetical protein OsI_18438 [Oryza sativa Indi...   149   3e-34

>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial [Vitis vinifera]
           gi|296087577|emb|CBI34833.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/112 (68%), Positives = 90/112 (80%)
 Frame = +1

Query: 1   TFIEGAMVGYTPKGMQIALDTLKEMNSRGIYLVHATGNALLLAASGEKTGYYTIANMLWD 180
           T +EGAMVGYTPKGM++A DTL +MN+RG +L    G+ LLL ASGEKTG YT AN +WD
Sbjct: 332 TLVEGAMVGYTPKGMELAQDTLVKMNARGFFLSPRMGSELLLVASGEKTGGYTTANYIWD 391

Query: 181 LMQARNITPSLPAVQAYYNGLKEREIPEDDPRLLVVSRTLDDLRTRFGRNPG 336
           LMQAR ITPS PAV+AYYNGL+EREIPEDD RL++VSR  D+ R RFG  PG
Sbjct: 392 LMQARKITPSFPAVEAYYNGLREREIPEDDARLVLVSRAYDNQRLRFGTGPG 443


>gb|AEQ94165.1| TPR-like domain containing protein [Elaeis guineensis]
          Length = 113

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/108 (67%), Positives = 91/108 (84%)
 Frame = +1

Query: 1   TFIEGAMVGYTPKGMQIALDTLKEMNSRGIYLVHATGNALLLAASGEKTGYYTIANMLWD 180
           T +EGAMVG+TP+GMQ+A DTL++MN+RGI+L    G+ LLLAA+GEK G YT AN +WD
Sbjct: 1   TLVEGAMVGHTPQGMQLAQDTLEKMNARGIFLNPKMGSDLLLAAAGEKMGGYTTANYIWD 60

Query: 181 LMQARNITPSLPAVQAYYNGLKEREIPEDDPRLLVVSRTLDDLRTRFG 324
           L+Q+R I PSLPAV+ Y+ GLK+REIP DDPRLL+VSRTLD+LR RFG
Sbjct: 61  LLQSRKINPSLPAVEVYHEGLKQREIPADDPRLLMVSRTLDNLRLRFG 108


>ref|XP_002526972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533724|gb|EEF35459.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/108 (71%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   TFIEGAMVGYTPKGMQIALDTLKEMNSRGIYLVHATGNALLLAASGEKTGYYTIANMLWD 180
           T +EGAMVGYTPKGMQ+A DTL  M SR + L    GN LLL A+GEKTG YT AN +WD
Sbjct: 374 TLVEGAMVGYTPKGMQLAQDTLVMMGSRNLSLGLRQGNDLLLMAAGEKTGGYTTANYIWD 433

Query: 181 LMQARNITPSLPAVQAYYNGLKEREIPEDDPRLLVVSRTLDDLRTRFG 324
           LM+AR  TPSL AV+AYYNGLKEREIPEDDPRLL VSR  D+LR RFG
Sbjct: 434 LMRARKFTPSLQAVEAYYNGLKEREIPEDDPRLLEVSRIYDNLRVRFG 481


>ref|XP_004141120.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Cucumis sativus]
           gi|449489492|ref|XP_004158328.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Cucumis sativus]
          Length = 442

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/108 (64%), Positives = 89/108 (82%)
 Frame = +1

Query: 1   TFIEGAMVGYTPKGMQIALDTLKEMNSRGIYLVHATGNALLLAASGEKTGYYTIANMLWD 180
           T +EGAM+GYTPKGMQ+A +TL+ MNSRG +L   +G+ LLLAA+GEKTG YT AN +WD
Sbjct: 331 TLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWD 390

Query: 181 LMQARNITPSLPAVQAYYNGLKEREIPEDDPRLLVVSRTLDDLRTRFG 324
           L++AR ITP  PAV AYY GLK+REIPEDDPRL++V+R  ++L+ RFG
Sbjct: 391 LLRAREITPLFPAVDAYYKGLKKREIPEDDPRLVLVTRIHENLQARFG 438


>gb|EEC78508.1| hypothetical protein OsI_18438 [Oryza sativa Indica Group]
          Length = 454

 Score =  149 bits (376), Expect = 3e-34
 Identities = 73/108 (67%), Positives = 86/108 (79%)
 Frame = +1

Query: 1   TFIEGAMVGYTPKGMQIALDTLKEMNSRGIYLVHATGNALLLAASGEKTGYYTIANMLWD 180
           T  EGAM+G+TP+GMQ+A +T+++M SR  +L    G  LLLAASGEKTG YTIAN +WD
Sbjct: 338 TLAEGAMIGHTPRGMQLAQETIEKMTSRNFFLNARMGTDLLLAASGEKTGGYTIANYVWD 397

Query: 181 LMQARNITPSLPAVQAYYNGLKEREIPEDDPRLLVVSRTLDDLRTRFG 324
           LMQ R ITPSLPAV+AYY GLKEREIP DDPRL+ VSR LD+L  RFG
Sbjct: 398 LMQNRRITPSLPAVEAYYKGLKEREIPSDDPRLMNVSRVLDNLSIRFG 445


Top