BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011547
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   235   5e-60
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-49
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   192   5e-47
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   173   2e-41
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...   171   9e-41

>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  235 bits (599), Expect = 5e-60
 Identities = 114/182 (62%), Positives = 142/182 (78%)
 Frame = -3

Query: 551 RSNKNPLNSLISLIKSTTQRTQLLQIHAYLLRTSLLQESSFSVPFLHRISLPPFQSLNYS 372
           +S     N LISLIKS +++T LLQIHA+++RTSL+Q    S+ FL R +L P + + YS
Sbjct: 62  KSRDESENQLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYS 121

Query: 371 LQIFSQILQPNVTHYNTMIRAYAMSIHPERGFYMYRDMMRQGIRPNPQSSSFVTKSCIRG 192
            Q+FSQI++P+ + YN MIRAY+MS  PE+GFY+YR+M R+G+ PNP SSSFV KSCIR 
Sbjct: 122 SQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRI 181

Query: 191 SSLFGGLQIHARILRDGHHSDSLLLTTLMDFYSCSGKCDNACKVFDEMPLQDNVAWNVLV 12
           SSL GGLQIHARILRDGH SD+LLLTTLMD YSC  K + ACKVFDE+P  D V+WNVL+
Sbjct: 182 SSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLI 241

Query: 11  SC 6
           SC
Sbjct: 242 SC 243


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  200 bits (508), Expect = 2e-49
 Identities = 98/173 (56%), Positives = 128/173 (73%)
 Frame = -3

Query: 524 LISLIKSTTQRTQLLQIHAYLLRTSLLQESSFSVPFLHRISLPPFQSLNYSLQIFSQILQ 345
           LISLIKS T ++QLLQIHA+++ TS +Q+   S+ FL R +  PF+ L YS ++F  +  
Sbjct: 30  LISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN 89

Query: 344 PNVTHYNTMIRAYAMSIHPERGFYMYRDMMRQGIRPNPQSSSFVTKSCIRGSSLFGGLQI 165
           P V+HYN M+RAY++S  P  G YMYRDM RQG+R +P SSSF  KSCI+  SL  G+QI
Sbjct: 90  PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 149

Query: 164 HARILRDGHHSDSLLLTTLMDFYSCSGKCDNACKVFDEMPLQDNVAWNVLVSC 6
           HARI  +GH +DSLLLT++MD YS  GK + ACK+FDE+P +D VAWNVL+SC
Sbjct: 150 HARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISC 202


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  192 bits (487), Expect = 5e-47
 Identities = 95/177 (53%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
 Frame = -3

Query: 533 LNSLISLIKSTTQRTQLLQIHAYLLRTSLLQESSFSVPFLHRISLP-PFQSLNYSLQIFS 357
           L ++IS IKS + +T+LLQIHA+++RT+L+Q  + S+ FL RI+L  P Q  +YS + F 
Sbjct: 3   LETVISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFG 62

Query: 356 QILQPNVTHYNTMIRAYAMSIHPERGFYMYRDMMRQGIRPNPQSSSFVTKSCIRGSSLFG 177
           Q+  P V+HYNTMIRA +MS  P++G  +YRDM R+GI  +P SSSF  KSCIR   L G
Sbjct: 63  QLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPG 122

Query: 176 GLQIHARILRDGHHSDSLLLTTLMDFYSCSGKCDNACKVFDEMPLQDNVAWNVLVSC 6
           G+Q+H  I +DGH  D+LLLT +MD YS   +  +ACKVFDEMP +D VAWNV++SC
Sbjct: 123 GVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISC 179


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  173 bits (439), Expect = 2e-41
 Identities = 94/186 (50%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
 Frame = -3

Query: 554 SRSNKNPLNSLISLIKSTTQRTQLLQIHAYLLRTSLLQESSFSVPFLHRISLPPF-QSLN 378
           S S+ +  + L+SLI S+T +  L QIHA LLRTSL++ S     FL R++L    + +N
Sbjct: 4   SISSSSGDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDIN 63

Query: 377 YSLQIFSQILQPNVTHYNTMIRAYAMSIHPERGFYMYRDMMRQGIRP-NPQSSSFVTKSC 201
           YS ++FSQ L P ++H NTMIRA+++S  P  GF ++R + R    P NP SSSF  K C
Sbjct: 64  YSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCC 123

Query: 200 IRGSSLFGGLQIHARILRDGHHSDSLLLTTLMDFYSCSGKCDNACKVFDEMPLQDNVAWN 21
           I+   L GGLQIH +I  DG  SDSLL+TTLMD YS      +ACKVFDE+P +D V+WN
Sbjct: 124 IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN 183

Query: 20  VLVSCY 3
           VL SCY
Sbjct: 184 VLFSCY 189


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score =  171 bits (433), Expect = 9e-41
 Identities = 93/186 (50%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
 Frame = -3

Query: 554 SRSNKNPLNSLISLIKSTTQRTQLLQIHAYLLRTSLLQESSFSVPFLHRISLPPF-QSLN 378
           S S+ +  + L+SLI S+T +  L QIHA LLRTSL++ S     F  R++L    + +N
Sbjct: 4   SISSSSSDDHLLSLIVSSTGKLHLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDIN 63

Query: 377 YSLQIFSQILQPNVTHYNTMIRAYAMSIHPERGFYMYRDMMRQGIRP-NPQSSSFVTKSC 201
           YS ++FSQ L P ++H NTMIRA+++S  P  GF ++R + R    P NP SSSF  K C
Sbjct: 64  YSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCC 123

Query: 200 IRGSSLFGGLQIHARILRDGHHSDSLLLTTLMDFYSCSGKCDNACKVFDEMPLQDNVAWN 21
           I+   L GGLQIH +I  DG  SDSLL+TTLMD YS      +ACKVFDE+P +D V+WN
Sbjct: 124 IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWN 183

Query: 20  VLVSCY 3
           VL+SCY
Sbjct: 184 VLISCY 189