BLASTX nr result

ID: Atractylodes21_contig00011537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011537
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   139   8e-31
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   119   8e-25
ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808...   107   3e-21
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...   107   4e-21
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  139 bits (350), Expect = 8e-31
 Identities = 99/226 (43%), Positives = 126/226 (55%), Gaps = 16/226 (7%)
 Frame = -3

Query: 642 IMDGRRHSVDIPLSKTLIALRRVRSLRDPSTNSLSRLSAFVDNLNWETNSSNGIVLEQVN 463
           +MDGRRHSVDIP+SKTL+ALRRVRSLRDPSTNS+S+ SA VD+LNWETNSSNGI L  V 
Sbjct: 92  MMDGRRHSVDIPISKTLVALRRVRSLRDPSTNSMSKFSALVDSLNWETNSSNGISLRFV- 150

Query: 462 NGLHEDDTCELNNLGLF---GQTEHHVLNCEMYHGQSTHNRKPGLCKNPG-WGDMKVHES 295
           NG  E        LGL    GQ E      E+Y G    + K    +NPG +G+  +  +
Sbjct: 151 NGFQEGGPDNNGXLGLENFPGQRE------ELYGGLRKPDPKLFSSENPGFFGNTGLAPT 204

Query: 294 GLLQSNQVPVCENI--------SLSERYHS----NYKDLPCMMPTSDYMEGVGSCNESME 151
              +++ +  C  I        SLSERY S    N  DL  + P+S+ +EG  SCN  + 
Sbjct: 205 VTKRADGLDYCGTIKEEAYDKKSLSERYCSGLRENGLDLMNITPSSNGLEGADSCNGPIL 264

Query: 150 VFIEAERQEHNGYXXXXXXXXXXXXXKVVGGDIMSCVSSPCLSMSD 13
               AER +H                  + GD++SCV SPC S+SD
Sbjct: 265 GSSHAERTDHXASKWKSQYKNQLKSFTGL-GDVVSCVGSPCPSLSD 309


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score =  119 bits (298), Expect = 8e-25
 Identities = 87/231 (37%), Positives = 122/231 (52%), Gaps = 20/231 (8%)
 Frame = -3

Query: 642 IMDGRRHSVDIPLSKTLIALRRVRSLRDPSTNSLSRLSAFVDNLNWETNSSNGIVLEQV- 466
           +MDGRRHSVDIP+S+TLIALRRVRSLRDPSTN +S+ SA ++N+NWETNS+NGI L+   
Sbjct: 1   MMDGRRHSVDIPISRTLIALRRVRSLRDPSTNCMSKFSALLENVNWETNSTNGISLQFTG 60

Query: 465 ---NNGLHEDDTCELNNLGLFGQTEHHVLNCEMYHGQSTHNRKPGLCKNPGWG------D 313
                G   +    LNN GL    +  + +  + H          L +    G       
Sbjct: 61  GCQQGGSDHNGFARLNNSGLNRIRDEEIDDFHLQHDLVKSKPNLNLAREENAGASLRTKK 120

Query: 312 MKVHESGLLQSNQVPVCENISLSERYHSNYKD----LPCMMPTSDYMEGVGSCNE----- 160
           ++  ++G+L   Q  V    SLSERY+ N++D    L C+ P S+      S NE     
Sbjct: 121 LEGLDNGVLY--QEDVSGKKSLSERYYINHRDKGLELTCITPLSN----AESNNELILRS 174

Query: 159 -SMEVFIEAERQEHNGYXXXXXXXXXXXXXKVVGGDIMSCVSSPCLSMSDA 10
             +E F ++  ++ + Y               + GDI+S V SPCLS+SDA
Sbjct: 175 PKVECFDQSISRKKSQYKNHDKSSG-------MVGDILSRVGSPCLSVSDA 218


>ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808544 [Glycine max]
          Length = 976

 Score =  107 bits (267), Expect = 3e-21
 Identities = 84/220 (38%), Positives = 108/220 (49%), Gaps = 10/220 (4%)
 Frame = -3

Query: 639 MDGRRHSVDIPLSKTLIALRRVRSLRDPSTNSLSRLSAFVDNLNWETNSSNGIVLE-QVN 463
           MDGRRHSVDIP+SKTL+ALRRVRSLRDPSTN +SRLS  +D+ +WE  SSNG+ L  +  
Sbjct: 1   MDGRRHSVDIPISKTLMALRRVRSLRDPSTNGVSRLSPLIDDGDWEDGSSNGVSLSLRFL 60

Query: 462 NGLHEDDTCELNNLGLF--------GQTEHHVLNCEMYHGQSTHNRKPGLCKNPGWGDMK 307
           NG H    C+ N  GL         GQ E      E+    S  N     C+     D  
Sbjct: 61  NGSH---ACDSNGNGLLRSSSLDFKGQREQDTAEFELDMWNSKMNHCGISCQEGQQDDGL 117

Query: 306 VHESGLLQSNQVPVCENISLSERYHSNYKDLPCMMPTSDYMEGVGSCNESMEVFIEAERQ 127
           V+ +   Q        N S    +     DL  +MP+S++++   SC  S      A R 
Sbjct: 118 VYSNPKQQCISGDKSSNESCCSNHEGRGLDLVSIMPSSNHLKDGESCYLS-----TATRV 172

Query: 126 EHNGYXXXXXXXXXXXXXKVVGGDIMSCV-SSPCLSMSDA 10
           EH+               +V+ GDI S V S  CLS+ DA
Sbjct: 173 EHSKSARKSLRKNQVKPSEVI-GDIASHVGSQQCLSVFDA 211


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score =  107 bits (266), Expect = 4e-21
 Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
 Frame = -3

Query: 639 MDGRRHSVDIPLSKTLIALRRVRSLRDPSTNSLSRLSAFVDNLNWETNSSNGIVLE-QVN 463
           MDGRRHSVDIP+SKTL+AL+RVRSLRDPSTN +SRLS  VD+ +WE  SSNG+ L  +  
Sbjct: 1   MDGRRHSVDIPISKTLVALKRVRSLRDPSTNGVSRLSPLVDDGDWEDGSSNGVSLSLRFL 60

Query: 462 NGLHEDDTCELNNLGLF--------GQTEHHVLNCEMYHGQSTHNRKPGLCKNPGWGDMK 307
           NG H    C+ N  GL         GQ E      E+    S  N     C+     D  
Sbjct: 61  NGSH---VCDSNGNGLLRSSSLDFKGQKEQDTAEFELEMWNSKMNYCGISCQEGLQDDGL 117

Query: 306 VHESGLLQSNQVPVCENISLSERYHSNYKDLPCMMPTSDYMEGVGSCNESMEVFIEAERQ 127
           V+ +   Q        N S    +     DL  +MP+S++++   SC  S+     A R 
Sbjct: 118 VYSNPKQQGISGDKSPNESCCSNHEGRGLDLVSIMPSSNHLKDGESCYLSI-----ATRV 172

Query: 126 EHNGYXXXXXXXXXXXXXKVVGGDIMSCV-SSPCLSMSDA 10
           EH+               +V+ GDI S V S  CLS+ DA
Sbjct: 173 EHSKSARKSLCKNQVKPSEVI-GDIASHVGSQQCLSVFDA 211


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score =  105 bits (261), Expect = 2e-20
 Identities = 75/213 (35%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
 Frame = -3

Query: 636 DGRRHSVDIPLSKTLIALRRVRSLRDPSTNSLSRLSAFVDNLNWETNSSNGIVLEQVN-- 463
           DGRRHSVDIP+++TLIALRRVRSLRDPSTNS+S+ SA ++N NWETNS+  I L+  N  
Sbjct: 3   DGRRHSVDIPITRTLIALRRVRSLRDPSTNSMSKFSALLENANWETNSTKDISLQSANGS 62

Query: 462 --NGLHEDDTCELNNLGLFGQTEHHVLNCEMYHGQSTHNRKPGLCKNPGWGDMKVHESGL 289
              G + +      NLGL GQ++  V N +      +   K  L      G +K  ++  
Sbjct: 63  KEGGSNHNRVSGWKNLGLDGQSKQQVDNFD----SGSDFEKSKLIFGDSLGGVKNMDAHF 118

Query: 288 LQSNQVPVCENISLSERYHSNYKDLPCMMPTSDYMEGVGSCNESMEVFIEAERQEHNGYX 109
               ++                 DL C+ P+S+++E   +  +S     + + Q + G  
Sbjct: 119 RNKKEL-----------------DLVCITPSSNHLEDSVTRRKSR---YKNQVQSYGGV- 157

Query: 108 XXXXXXXXXXXXKVVGGDIMSCVSSPCLSMSDA 10
                           GDI+S V SPC S SDA
Sbjct: 158 ----------------GDILSRVGSPCFSGSDA 174


Top