BLASTX nr result

ID: Atractylodes21_contig00011509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011509
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric...   177   6e-43
ref|XP_002321779.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-l...   172   3e-41
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l...   172   3e-41

>ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|222832586|gb|EEE71063.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  180 bits (456), Expect = 1e-43
 Identities = 93/110 (84%), Positives = 101/110 (91%), Gaps = 1/110 (0%)
 Frame = +3

Query: 162 VYGGDIPDEGEMDADVEMS-RNETEGDENNNSKDLEDMKKRLKEIEEEAGALREMQAKVE 338
           VYGG+IPDEGEMDADV+MS R E +  ++ NSKDLEDMKKRLKEIEEEAGALREMQAKVE
Sbjct: 16  VYGGEIPDEGEMDADVDMSSRAEEDEYQDPNSKDLEDMKKRLKEIEEEAGALREMQAKVE 75

Query: 339 KEMGSVQDDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCG 488
           KEMG+VQD S GASATQAEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCG
Sbjct: 76  KEMGAVQD-SPGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCG 124


>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550156|gb|EEF51643.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  177 bits (450), Expect = 6e-43
 Identities = 92/118 (77%), Positives = 99/118 (83%), Gaps = 9/118 (7%)
 Frame = +3

Query: 162 VYGGDIPDEGEMDADVEMSRNETEGDE---------NNNSKDLEDMKKRLKEIEEEAGAL 314
           VYG +IPDEGEMDAD++MS    E +E         N NSKDLEDMKKRLKEIEEEAGAL
Sbjct: 13  VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIEEEAGAL 72

Query: 315 REMQAKVEKEMGSVQDDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCG 488
           REMQAKVEKEMG+VQD SSG SATQAEKEE D+RS+YVGNVDYACTPEEVQQHFQSCG
Sbjct: 73  REMQAKVEKEMGAVQDSSSG-SATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCG 129


>ref|XP_002321779.1| predicted protein [Populus trichocarpa] gi|222868775|gb|EEF05906.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  172 bits (437), Expect = 2e-41
 Identities = 89/110 (80%), Positives = 98/110 (89%), Gaps = 1/110 (0%)
 Frame = +3

Query: 162 VYGGDIPDEGEMDADVEMS-RNETEGDENNNSKDLEDMKKRLKEIEEEAGALREMQAKVE 338
           VYGG+IPDEGEMDAD +MS R E +  ++ NSKDLEDMK+RLKEIEEEAGALREMQAKVE
Sbjct: 16  VYGGEIPDEGEMDADADMSSRAEEDEYQDPNSKDLEDMKRRLKEIEEEAGALREMQAKVE 75

Query: 339 KEMGSVQDDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCG 488
           KEMG+VQ    GASATQAEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCG
Sbjct: 76  KEMGAVQ----GASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCG 121


>ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 229

 Score =  172 bits (436), Expect = 3e-41
 Identities = 90/115 (78%), Positives = 100/115 (86%), Gaps = 6/115 (5%)
 Frame = +3

Query: 162 VYGGDIPDEGEMDADVEMS--RNETEGDE----NNNSKDLEDMKKRLKEIEEEAGALREM 323
           VYGGDIPD+ E+DAD++MS  R + EG +    N NSKDLEDMK+RLKEIEEEAGALREM
Sbjct: 14  VYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREM 73

Query: 324 QAKVEKEMGSVQDDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCG 488
           QAKVEKEMG+VQD SS  SATQAEKEE D+RS+YVGNVDYACTPEEVQQHFQSCG
Sbjct: 74  QAKVEKEMGAVQDSSS-TSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCG 127


>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
          Length = 226

 Score =  172 bits (436), Expect = 3e-41
 Identities = 91/113 (80%), Positives = 99/113 (87%), Gaps = 4/113 (3%)
 Frame = +3

Query: 162 VYGGDIPDEGEMDADVE----MSRNETEGDENNNSKDLEDMKKRLKEIEEEAGALREMQA 329
           VYGG+IPDEGEMDAD E    +SR E + D N  SK++EDM+KRLKEIEEEAGALREMQA
Sbjct: 14  VYGGEIPDEGEMDADAEDVDMVSRPEDDSDPN--SKNIEDMRKRLKEIEEEAGALREMQA 71

Query: 330 KVEKEMGSVQDDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCG 488
           KVEKEMG+VQD SS ASATQAEKEE D+RSIYVGNVDYACTPEEVQQHFQSCG
Sbjct: 72  KVEKEMGAVQDSSS-ASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCG 123


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