BLASTX nr result

ID: Atractylodes21_contig00011492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011492
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...   436   e-120
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g...   407   e-111
ref|XP_003518607.1| PREDICTED: SKP1-interacting partner 15-like ...   390   e-106
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...   390   e-106

>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score =  436 bits (1120), Expect = e-120
 Identities = 224/347 (64%), Positives = 259/347 (74%), Gaps = 11/347 (3%)
 Frame = +1

Query: 226  QLPQDIIHQIFSRISLRQVLICRSVSKILNSTLSSPSFTHLLVTTSXXXXXXXXXXXXXX 405
            +LPQD +H IFS + LRQ++ICRSV K    TL++P+F  L+ T                
Sbjct: 8    RLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELISTQPPLNLIALRPPHHHH 67

Query: 406  XXXXXXXXXXX---------DPIENKWLHFPLSFLPFPSAHPIASAAALGLLYLWADSPA 558
                                DP  N+W+ FPLSFLPF S  P+AS+  LGL+YLWADS  
Sbjct: 68   HHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASS--LGLVYLWADSLN 125

Query: 559  S-DSNKSLVVCNPLTRQYKTLPQLGSAWSRHGSVLVGSTNNRVIVLNELAALYYSNSTNT 735
            S +SNKSL+VCNPLTR ++ LPQLGSAWSRHGSVLVGS N RV+VL ELA LY+S S + 
Sbjct: 126  SLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPN-RVLVLTELATLYFSGS-DQ 183

Query: 736  WLKFSSNLPSKPRSPIFVNDSIMALCDVGSPWRSQWKLFNCTLQNLQASQPWNTLEKHEW 915
            WLKFSSNLPSKPRSPI V+DS++ALCDVGSPWRSQWKLF CTL +LQ SQPW  L++HEW
Sbjct: 184  WLKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 243

Query: 916  GDVFDILKRPRLLKGFGDAILMIGGLKSSFSLNASCSTILILRLDLGTLEWGEAGRMPVE 1095
            GDVFDIL+RPRL+KG G+ ILM+GGLKSSFSLNA CSTILILRLDL +LEW E GRMP E
Sbjct: 244  GDVFDILRRPRLVKGLGNQILMVGGLKSSFSLNAVCSTILILRLDLDSLEWDELGRMPPE 303

Query: 1096 MFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWE-SNEKEKEEWRWI 1233
            MFR FQESSKFKVFG GNRVCFSAKR+GRLALW+ S E  K +WRWI
Sbjct: 304  MFRCFQESSKFKVFGAGNRVCFSAKRVGRLALWDYSTETGKGDWRWI 350


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  418 bits (1075), Expect = e-114
 Identities = 214/354 (60%), Positives = 259/354 (73%), Gaps = 13/354 (3%)
 Frame = +1

Query: 211  DNIFSQLPQDIIHQIFSRISLRQVLICRSVSKILNSTLSSPSFTHLLVTTSXXXXXXXXX 390
            D+  ++LPQD +HQIFS + LRQ++ICRSV K  N  L+SPSF  L+ T           
Sbjct: 3    DSPINRLPQDTLHQIFSSLPLRQIMICRSVCKFFNQMLTSPSFVDLISTQPPLRFLALRP 62

Query: 391  XXXXXXXXXXXXXXXX---------DPIENKWLHFPLSFLPFPSAHPIASAAALGLLYLW 543
                                     DP +N+WL F LSFLPF S HP+ASA+  GL+YLW
Sbjct: 63   PHHHHHLHHQRQNSHVSSVPYLHVFDPDQNQWLRFSLSFLPFRSPHPVASAS--GLIYLW 120

Query: 544  ADSPAS-DSNKSLVVCNPLTRQYKTLPQLGSAWSRHGSVLVGSTNNRVIVLNELAALYYS 720
             +SP S +SN+SLVVCNPLTRQ++ LPQLGSAWSRHGSVLV S N+RV+VL ELAALY+S
Sbjct: 121  GESPTSIESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFS 180

Query: 721  NS--TNTWLKFSSNLPSKPRSPIFVNDSIMALCDVGSPWRSQWKLFNCTLQNLQAS-QPW 891
            N+  TN+WL FS+NLPSKPRSPI ++DS+ ALCDVGSPWRSQWKLF C L  L  +   W
Sbjct: 181  NTNKTNSWLTFSANLPSKPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNNW 240

Query: 892  NTLEKHEWGDVFDILKRPRLLKGFGDAILMIGGLKSSFSLNASCSTILILRLDLGTLEWG 1071
              LE+ EWGD+FDI+KRPRL++G G+ +LMIGGLKS+FSLN SCSTILILRLDL  LEW 
Sbjct: 241  VCLERQEWGDIFDIIKRPRLVRGKGNKLLMIGGLKSNFSLNTSCSTILILRLDLERLEWE 300

Query: 1072 EAGRMPVEMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWESNEKEKEEWRWI 1233
            EAGRMPV+M+R FQESSK KVFGGG+RVCFSAKR+ +LALW+  + +   WRWI
Sbjct: 301  EAGRMPVDMYRSFQESSKLKVFGGGDRVCFSAKRMRKLALWD--DCDGVVWRWI 352


>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
            gi|222856938|gb|EEE94485.1| f-box family protein [Populus
            trichocarpa]
          Length = 374

 Score =  407 bits (1047), Expect = e-111
 Identities = 210/348 (60%), Positives = 256/348 (73%), Gaps = 11/348 (3%)
 Frame = +1

Query: 223  SQLPQDIIHQIFSRISLRQVLICRSVSKILNSTLSSPSFTHLLVTTSXXXXXXXXXXXXX 402
            ++LPQD ++QIFS + LRQ++ICRSV K  N  L+SPSF  L+ T +             
Sbjct: 7    NRLPQDTLNQIFSSLPLRQIMICRSVCKFFNQMLTSPSFMDLISTQTPLRFLALRPPHHH 66

Query: 403  XXXXXXXXXXXX-------DPIENKWLHFPLSFLPFPSAHPIASAAALGLLYLWADSPAS 561
                               DP +N+WL F LSFLPF S  P+ASA+  GLLYLW +SP S
Sbjct: 67   HHHQRHNSHVSSLPYLHVFDPDQNQWLRFSLSFLPFRSPQPVASAS--GLLYLWGESPNS 124

Query: 562  -DSNKSLVVCNPLTRQYKTLPQLGSAWSRHGSVLVGSTNNRVIVLNELAALYYSNS--TN 732
             +SN+SLVVCNPLTRQ++ LPQLGSAWSRHGSVLV S N+RV+VL ELAALY+SN+  TN
Sbjct: 125  LESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNTNKTN 184

Query: 733  TWLKFSSNLPSKPRSPIFVNDSIMALCDVGSPWRSQWKLFNCTLQNLQAS-QPWNTLEKH 909
            +WL FS+NLPSKPRSPI ++DS+ ALCDVGS WRSQWKLF CTL NL  S   W  L + 
Sbjct: 185  SWLTFSANLPSKPRSPILISDSVFALCDVGSRWRSQWKLFTCTLTNLNNSYNNWVCLGRL 244

Query: 910  EWGDVFDILKRPRLLKGFGDAILMIGGLKSSFSLNASCSTILILRLDLGTLEWGEAGRMP 1089
            EWGD+FDI+KRPRL++G G+ +LMIG LKS+FSLN SCSTILILRLDL  +EW EAGRMP
Sbjct: 245  EWGDIFDIIKRPRLVRGKGNKLLMIGVLKSNFSLNPSCSTILILRLDLARMEWEEAGRMP 304

Query: 1090 VEMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWESNEKEKEEWRWI 1233
             EM++ FQESSKFK+FGGG+RVC SAKR+G+LALW+  + +   WRWI
Sbjct: 305  SEMYKSFQESSKFKIFGGGDRVCLSAKRVGKLALWD--DCDGVVWRWI 350


>ref|XP_003518607.1| PREDICTED: SKP1-interacting partner 15-like [Glycine max]
          Length = 367

 Score =  390 bits (1002), Expect = e-106
 Identities = 199/340 (58%), Positives = 244/340 (71%), Gaps = 4/340 (1%)
 Frame = +1

Query: 226  QLPQDIIHQIFSRISLRQVLICRSVSKILNSTLSSPSFTHLLVTTSXXXXXXXXXXXXXX 405
            +L +D + QIF R+ LR+++ICRSVSK     LS+PSF  L V +S              
Sbjct: 9    RLAEDSLRQIFCRLPLREIMICRSVSKFFLQLLSTPSF--LQVLSSSHPPLQLLALRNRH 66

Query: 406  XXXXXXXXXXXDPIENKWLHFPLSFLPFPSAHPIASAAALGLLYLWADSPASDSNKSLVV 585
                       DP    WLHFPL FLPF S  P+AS+  LGLLYLWA + ++ ++KSL+ 
Sbjct: 67   HTPSHTSLPLFDPATKSWLHFPLDFLPFHSPLPVASS--LGLLYLWAHNNSNSNSKSLIC 124

Query: 586  CNPLTRQYKTLPQLGSAWSRHGSVLVGSTNNRVIVLNELAALYYSNSTNTWLKFSSNLPS 765
            CNPLTR ++ LP LGSAWSRHGSVLV S  +RV+VL ELAALY   +T TWLKFSSNLPS
Sbjct: 125  CNPLTRTFRVLPHLGSAWSRHGSVLVDS-EDRVMVLTELAALYCHRNTTTWLKFSSNLPS 183

Query: 766  KPRSPIFVNDSIMALCDVGSPWRSQWKLFNCTLQNLQAS--QPWNTLEKHEWGDVFDILK 939
            KPRS + +NDS  ALCDVGSPWR++WKLF+CT+++   S    W+ L++HEWGDVFD+L 
Sbjct: 184  KPRSSLLINDSAFALCDVGSPWRNRWKLFSCTIKSTTTSVVPVWSPLDRHEWGDVFDVLN 243

Query: 940  RPRLLK-GFGDAILMIGGLKSSFSLNASCSTILILRLDLGTLEWGEAGRMPVEMFRFFQE 1116
            RPRL++ G G+ ILM+GGLKSSF+LNA CSTIL+LRLDL  L W EA RMP EMFR F+E
Sbjct: 244  RPRLVRGGHGNFILMVGGLKSSFALNAPCSTILVLRLDLDNLRWDEAARMPPEMFRAFRE 303

Query: 1117 SSKFKVFGG-GNRVCFSAKRIGRLALWESNEKEKEEWRWI 1233
            S+KFKVFGG G+ VCFSAKRIG+LALW+    E  EWRWI
Sbjct: 304  STKFKVFGGAGDMVCFSAKRIGKLALWDRRASEGHEWRWI 343


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333503|gb|EFH63921.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score =  390 bits (1001), Expect = e-106
 Identities = 205/351 (58%), Positives = 248/351 (70%), Gaps = 14/351 (3%)
 Frame = +1

Query: 223  SQLPQDIIHQIFSRISLRQVLICRSVSKILNSTLSSPSFT---------HLLVTTSXXXX 375
            ++LP D +HQIFS + LR +++CRSV K  N  L+S  F          +LL        
Sbjct: 7    NRLPPDSLHQIFSSLPLRDIMVCRSVCKFFNQLLTSQCFIEIISTRPPLNLLALRPPHHH 66

Query: 376  XXXXXXXXXXXXXXXXXXXXXDPIENKWLHFPLSFLPFPSAHPIASAAALGLLYLWADS- 552
                                 DP +N+W  F L FLPF S  P+AS++  GL+YLW DS 
Sbjct: 67   HSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSS--GLIYLWGDSI 124

Query: 553  PASDSNKSLVVCNPLTRQYKTLPQLGSAWSRHGSVLVGSTNNRVIVLNELAALYYSNST- 729
              ++S+KSLV CNPLTRQ+K LPQLGSAWSRHG+VLV S N RV+VL ELAALYYS +  
Sbjct: 125  DLAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVN-RVMVLTELAALYYSGTVV 183

Query: 730  -NTWLKFSSNLPSKPRSPIFVNDSIMALCDVGSPWRSQWKLFNCTLQNLQASQP-WNTLE 903
             N W KFSSNLPSKPRSP+ ++ S+ ALCDVGSPWRSQWKLF+C L NL  +   W  LE
Sbjct: 184  ANQWFKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLE 243

Query: 904  KHEWGDVFDILKRPRLLKGFGDA-ILMIGGLKSSFSLNASCSTILILRLDLGTLEWGEAG 1080
            KHEWGD+FDI+KRPRLL+G GD+ +LMIGGLKS+FSLN +CSTILILRLDL +LEW EAG
Sbjct: 244  KHEWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEAG 303

Query: 1081 RMPVEMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWESNEKEKEEWRWI 1233
            RMP+EM+R FQESSKFKVFGGG+RV FSAKR+G+LA+W+      E WRWI
Sbjct: 304  RMPLEMYRGFQESSKFKVFGGGDRVYFSAKRMGKLAMWDC----WEGWRWI 350


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