BLASTX nr result

ID: Atractylodes21_contig00011482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011482
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39513.3| unnamed protein product [Vitis vinifera]              189   8e-46
emb|CBI36838.3| unnamed protein product [Vitis vinifera]              189   8e-46
ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l...   187   3e-45
ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-l...   187   3e-45
ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-l...   187   3e-45

>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  189 bits (479), Expect = 8e-46
 Identities = 87/89 (97%), Positives = 88/89 (98%)
 Frame = -3

Query: 676 KMLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 497
           KMLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 13  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 72

Query: 496 YIRGNTIKYLRVPDEVIDKVQEETKNRTD 410
           YIRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 73  YIRGNTIKYLRVPDEVIDKVQEETKNRAD 101


>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  189 bits (479), Expect = 8e-46
 Identities = 87/89 (97%), Positives = 88/89 (98%)
 Frame = -3

Query: 676 KMLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 497
           KMLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 46  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 105

Query: 496 YIRGNTIKYLRVPDEVIDKVQEETKNRTD 410
           YIRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 106 YIRGNTIKYLRVPDEVIDKVQEETKNRAD 134


>ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 149

 Score =  187 bits (474), Expect = 3e-45
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = -3

Query: 673 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 494
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 493 IRGNTIKYLRVPDEVIDKVQEETKNRTD 410
           IRGNTIKYLRVPDEVIDKVQEETK+RTD
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTD 88


>ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 149

 Score =  187 bits (474), Expect = 3e-45
 Identities = 86/88 (97%), Positives = 87/88 (98%)
 Frame = -3

Query: 673 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 494
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 493 IRGNTIKYLRVPDEVIDKVQEETKNRTD 410
           IRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKNRAD 88


>ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 150

 Score =  187 bits (474), Expect = 3e-45
 Identities = 86/88 (97%), Positives = 87/88 (98%)
 Frame = -3

Query: 673 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 494
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 493 IRGNTIKYLRVPDEVIDKVQEETKNRTD 410
           IRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKNRAD 88


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