BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011299
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thal...   168   7e-40
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   168   7e-40
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...   168   7e-40
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              168   7e-40
emb|CAB60192.1| putative sigma-like transcription factor [Arabid...   168   7e-40

>ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thaliana]
           gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
           polymerase sigma factor sigF, chloroplastic; Short=Sigma
           factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
           OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
           polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
           factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
           SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
           sigma factor-like protein [Arabidopsis thaliana]
           gi|16604647|gb|AAL24116.1| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20197948|gb|AAD31584.2| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20259557|gb|AAM14121.1| putative RNA polymerase
           sigma-70 factor protein [Arabidopsis thaliana]
           gi|330254238|gb|AEC09332.1| RNApolymerase sigma-subunit
           F [Arabidopsis thaliana]
          Length = 547

 Score =  168 bits (426), Expect = 7e-40
 Identities = 80/108 (74%), Positives = 96/108 (88%)
 Frame = +2

Query: 323 LQHGISSREKLICANLRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFA 502
           +  G SSREKLI ANLR+VV+IAKQY+ RGL+ QDLLQEGSMGLM+SV KFKPQ+GCRFA
Sbjct: 301 IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 360

Query: 503 TYAYWWIRQSIRRAIFQNSKLIRLPEGVYTLLYKVSEAKRICIREGHH 646
           TYAYWWIRQSIR++IFQNS+ IRLPE VY LL KVSEA++ C++EG++
Sbjct: 361 TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNY 408


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  168 bits (426), Expect = 7e-40
 Identities = 81/109 (74%), Positives = 96/109 (88%)
 Frame = +2

Query: 323 LQHGISSREKLICANLRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFA 502
           L  G  SR+KLI ANLRMVV+IAKQY+GRGL+LQDLLQEGSMGLM SV KFKP AGCRFA
Sbjct: 326 LHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFA 385

Query: 503 TYAYWWIRQSIRRAIFQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHE 649
           +YAYWWIRQ++R+AIFQ+S+ IRLPE +Y+LL KV EAKR+ I+EGHH+
Sbjct: 386 SYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHD 434


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
           gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  168 bits (426), Expect = 7e-40
 Identities = 80/108 (74%), Positives = 96/108 (88%)
 Frame = +2

Query: 323 LQHGISSREKLICANLRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFA 502
           +  G SSREKLI ANLR+VV+IAKQY+ RGL+ QDLLQEGSMGLM+SV KFKPQ+GCRFA
Sbjct: 300 IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 359

Query: 503 TYAYWWIRQSIRRAIFQNSKLIRLPEGVYTLLYKVSEAKRICIREGHH 646
           TYAYWWIRQSIR++IFQNS+ IRLPE VY LL KVSEA++ C++EG++
Sbjct: 360 TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNY 407


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  168 bits (426), Expect = 7e-40
 Identities = 81/109 (74%), Positives = 96/109 (88%)
 Frame = +2

Query: 323 LQHGISSREKLICANLRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFA 502
           L  G  SR+KLI ANLRMVV+IAKQY+GRGL+LQDLLQEGSMGLM SV KFKP AGCRFA
Sbjct: 315 LHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFA 374

Query: 503 TYAYWWIRQSIRRAIFQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHE 649
           +YAYWWIRQ++R+AIFQ+S+ IRLPE +Y+LL KV EAKR+ I+EGHH+
Sbjct: 375 SYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHD 423


>emb|CAB60192.1| putative sigma-like transcription factor [Arabidopsis thaliana]
          Length = 487

 Score =  168 bits (426), Expect = 7e-40
 Identities = 80/108 (74%), Positives = 96/108 (88%)
 Frame = +2

Query: 323 LQHGISSREKLICANLRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFA 502
           +  G SSREKLI ANLR+VV+IAKQY+ RGL+ QDLLQEGSMGLM+SV KFKPQ+GCRFA
Sbjct: 241 IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 300

Query: 503 TYAYWWIRQSIRRAIFQNSKLIRLPEGVYTLLYKVSEAKRICIREGHH 646
           TYAYWWIRQSIR++IFQNS+ IRLPE VY LL KVSEA++ C++EG++
Sbjct: 301 TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNY 348