BLASTX nr result

ID: Atractylodes21_contig00011288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011288
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]   353   8e-95
emb|CBI34504.3| unnamed protein product [Vitis vinifera]              348   2e-93
ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis...   337   6e-90
ref|XP_002509987.1| conserved hypothetical protein [Ricinus comm...   335   2e-89
gb|AFK35844.1| unknown [Medicago truncatula]                          330   6e-88

>ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]
          Length = 307

 Score =  353 bits (905), Expect = 8e-95
 Identities = 184/309 (59%), Positives = 215/309 (69%), Gaps = 15/309 (4%)
 Frame = -1

Query: 1234 MEISYTFSCNGDFPFISLFLALIVTLVCCFFSLLPFRLLKFSQSDKT------------- 1094
            MEI+ +F+  GDF F+   +AL+V+ +C   +L   R    S   K+             
Sbjct: 1    MEIASSFA--GDFSFLQFLVALVVSGLCLVCALFAVRFSPASFGRKSRSVESDGGGSGGS 58

Query: 1093 --KACNCTCSNCKGFVGGSDSMAVTATARMMNXXXXXXXXXXXXXXXXQMIGASMMEQLV 920
              KAC+C C  C+    G  + A  A A  +N                   GASMMEQLV
Sbjct: 59   LRKACSCDCL-CRSAESGP-ATATAAAAAYLNGGAEEMLDRALVVSER-QTGASMMEQLV 115

Query: 919  PEITTHALSYLDYPSLCRLSMTNSSMRRAANDDNAWKALYHKDFTMEQDSVTPANGWKAY 740
            PEITTHALSYLDYPSLCRLSMTNS MR+AANDDNAWKALYHKDFT+EQDSVTP NGWKAY
Sbjct: 116  PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPTNGWKAY 175

Query: 739  YAATRAIVNINQHFFDIIRERSLPEMGRLWLNADYVKCIHPSGELFTGYSGVLGSWQLAF 560
            YAATRAIVNIN  FF+IIRERS+  M RLW NADYVKC+H SGELFTGY+ V+ SWQLAF
Sbjct: 176  YAATRAIVNINAEFFNIIRERSITSMSRLWFNADYVKCVHASGELFTGYNAVIESWQLAF 235

Query: 559  NWEPAVDFQIRDVRSRVLTGVAWVTMKAYVGMEHSPLNVTNVFELHNGQWSMVHHHSSVM 380
            NW+  VDFQ+RDVR+RVLT +AWVTMK +V ME  P NVTNVFE HNG+W MVHHHSSV+
Sbjct: 236  NWDQGVDFQVRDVRARVLTDMAWVTMKTFVDMETGPFNVTNVFEFHNGRWFMVHHHSSVL 295

Query: 379  LANGEMGDQ 353
            + +GE+  Q
Sbjct: 296  I-DGEVDQQ 303


>emb|CBI34504.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  348 bits (893), Expect = 2e-93
 Identities = 181/303 (59%), Positives = 209/303 (68%), Gaps = 15/303 (4%)
 Frame = -1

Query: 1216 FSCNGDFPFISLFLALIVTLVCCFFSLLPFRLLKFSQSDKT---------------KACN 1082
            F C  DF F+   +AL+V+ +C   +L   R    S   K+               KAC+
Sbjct: 25   FGC--DFSFLQFLVALVVSGLCLVCALFAVRFSPASFGRKSRSVESDGGGSGGSLRKACS 82

Query: 1081 CTCSNCKGFVGGSDSMAVTATARMMNXXXXXXXXXXXXXXXXQMIGASMMEQLVPEITTH 902
            C C  C+    G  + A  A A  +N                   GASMMEQLVPEITTH
Sbjct: 83   CDCL-CRSAESGP-ATATAAAAAYLNGGAEEMLDRALVVSER-QTGASMMEQLVPEITTH 139

Query: 901  ALSYLDYPSLCRLSMTNSSMRRAANDDNAWKALYHKDFTMEQDSVTPANGWKAYYAATRA 722
            ALSYLDYPSLCRLSMTNS MR+AANDDNAWKALYHKDFT+EQDSVTP NGWKAYYAATRA
Sbjct: 140  ALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPTNGWKAYYAATRA 199

Query: 721  IVNINQHFFDIIRERSLPEMGRLWLNADYVKCIHPSGELFTGYSGVLGSWQLAFNWEPAV 542
            IVNIN  FF+IIRERS+  M RLW NADYVKC+H SGELFTGY+ V+ SWQLAFNW+  V
Sbjct: 200  IVNINAEFFNIIRERSITSMSRLWFNADYVKCVHASGELFTGYNAVIESWQLAFNWDQGV 259

Query: 541  DFQIRDVRSRVLTGVAWVTMKAYVGMEHSPLNVTNVFELHNGQWSMVHHHSSVMLANGEM 362
            DFQ+RDVR+RVLT +AWVTMK +V ME  P NVTNVFE HNG+W MVHHHSSV++ +GE+
Sbjct: 260  DFQVRDVRARVLTDMAWVTMKTFVDMETGPFNVTNVFEFHNGRWFMVHHHSSVLI-DGEV 318

Query: 361  GDQ 353
              Q
Sbjct: 319  DQQ 321


>ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis sativus]
            gi|449506211|ref|XP_004162683.1| PREDICTED: F-box protein
            SKIP8-like [Cucumis sativus]
          Length = 313

 Score =  337 bits (863), Expect = 6e-90
 Identities = 172/292 (58%), Positives = 206/292 (70%), Gaps = 17/292 (5%)
 Frame = -1

Query: 1177 LALIVTLVCCFFSL--------LPF-RLLKFSQSDK--TKACNCTCSNCKGFV-GGSDSM 1034
            +A IVT +C   ++        +P+ R  K  QS+   T+ CNCTCS   G V  G D  
Sbjct: 18   IAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCNCTCSLNGGVVIRGLDPR 77

Query: 1033 A-----VTATARMMNXXXXXXXXXXXXXXXXQMIGASMMEQLVPEITTHALSYLDYPSLC 869
            A      + +   +N                +  GASMMEQLVPEITTHALSYLDYPSLC
Sbjct: 78   AEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLC 137

Query: 868  RLSMTNSSMRRAANDDNAWKALYHKDFTMEQDSVTPANGWKAYYAATRAIVNINQHFFDI 689
            RLSMTNS MR+AANDDNAWKALYHKDFT+EQD+VTP NGWK+YYAATR I+NIN  F++I
Sbjct: 138  RLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATRTIMNINAQFYNI 197

Query: 688  IRERSLPEMGRLWLNADYVKCIHPSGELFTGYSGVLGSWQLAFNWEPAVDFQIRDVRSRV 509
            IR+RSL  M R WLNADYVKCIH SGE F+GY+ V+ SWQ+AFNWE  ++FQ+RDVR+RV
Sbjct: 198  IRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAFNWEQGINFQVRDVRARV 257

Query: 508  LTGVAWVTMKAYVGMEHSPLNVTNVFELHNGQWSMVHHHSSVMLANGEMGDQ 353
            LT +AWV+MK YV M+  P NVTN++E HNG+W MVHHHSSVML  GEM  Q
Sbjct: 258  LTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGEMEQQ 309


>ref|XP_002509987.1| conserved hypothetical protein [Ricinus communis]
            gi|223549886|gb|EEF51374.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 302

 Score =  335 bits (859), Expect = 2e-89
 Identities = 168/296 (56%), Positives = 201/296 (67%), Gaps = 15/296 (5%)
 Frame = -1

Query: 1195 PFISLFLALIVTLVCCFFSLLPFRLLKFSQSD---------KTKACNCTCSN------CK 1061
            PF+      +++L+  FF++     LK   SD         +T  C C+CS       C 
Sbjct: 16   PFLLASSLTLLSLLLAFFTIRSKSSLKSPPSDSPATSPAHKRTSNCCCSCSCHSAVPVCA 75

Query: 1060 GFVGGSDSMAVTATARMMNXXXXXXXXXXXXXXXXQMIGASMMEQLVPEITTHALSYLDY 881
               GG D +A   T                        GASMMEQLVPEITTHALSYLDY
Sbjct: 76   HINGGGDMVAAVTTTTEKGVVDR-------------QTGASMMEQLVPEITTHALSYLDY 122

Query: 880  PSLCRLSMTNSSMRRAANDDNAWKALYHKDFTMEQDSVTPANGWKAYYAATRAIVNINQH 701
            PSLCRLSMTNS MR+AANDDNAWKALYHKDFT+EQD+VTP NGWKAYYA+TRAIVN N  
Sbjct: 123  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPVNGWKAYYASTRAIVNANTE 182

Query: 700  FFDIIRERSLPEMGRLWLNADYVKCIHPSGELFTGYSGVLGSWQLAFNWEPAVDFQIRDV 521
            FF++I++RSL  M R+WLNADYVKCIH SGELF+GY+ V+ SWQLAFNWE  ++FQ+RDV
Sbjct: 183  FFNVIKDRSLQAMSRIWLNADYVKCIHASGELFSGYNAVMQSWQLAFNWEQGLEFQVRDV 242

Query: 520  RSRVLTGVAWVTMKAYVGMEHSPLNVTNVFELHNGQWSMVHHHSSVMLANGEMGDQ 353
            R+RVLT +AWVTMK Y  M+  P  VTN+FE HN +W MVHHHSSVML +G++  Q
Sbjct: 243  RARVLTDMAWVTMKTYFDMDTGPFTVTNIFEFHNDRWYMVHHHSSVMLIDGDVDQQ 298


>gb|AFK35844.1| unknown [Medicago truncatula]
          Length = 284

 Score =  330 bits (846), Expect = 6e-88
 Identities = 170/284 (59%), Positives = 203/284 (71%), Gaps = 3/284 (1%)
 Frame = -1

Query: 1195 PFISLFLALIVTLVCCFFSLLPF-RLLKFSQ--SDKTKACNCTCSNCKGFVGGSDSMAVT 1025
            PF+   LA+ VT +C F +L  F R    S+  +  TK CNC  S+       SDS AV 
Sbjct: 10   PFL---LAVTVTALCFFIALFSFFRTFSLSRRFTPSTKHCNCASSD-------SDSDAVV 59

Query: 1024 ATARMMNXXXXXXXXXXXXXXXXQMIGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSS 845
                                   +  G+SMME+LVPEITTHALSYLDYPSLCRLSMTNS 
Sbjct: 60   PYLNG-GFSQMTEISPPPVVLADRRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSL 118

Query: 844  MRRAANDDNAWKALYHKDFTMEQDSVTPANGWKAYYAATRAIVNINQHFFDIIRERSLPE 665
            MR+AANDDNAWKALYHKDFT+EQDSV P+NGWKAYYAATRAIV +N  FF+I+R++S+  
Sbjct: 119  MRKAANDDNAWKALYHKDFTLEQDSVRPSNGWKAYYAATRAIVIVNTEFFNILRDKSISA 178

Query: 664  MGRLWLNADYVKCIHPSGELFTGYSGVLGSWQLAFNWEPAVDFQIRDVRSRVLTGVAWVT 485
            M R WLNADYVKC+H SGELF+GY+GV+ SWQL FNW+  ++FQ+RDVR+RVLT +AWVT
Sbjct: 179  MSRFWLNADYVKCVHASGELFSGYNGVMQSWQLVFNWDQGLNFQVRDVRARVLTDMAWVT 238

Query: 484  MKAYVGMEHSPLNVTNVFELHNGQWSMVHHHSSVMLANGEMGDQ 353
            MK YV M+  P NVTNVFE HNG+W MVHHHSSVM  NG++  Q
Sbjct: 239  MKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVM--NGDVEQQ 280


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