BLASTX nr result

ID: Atractylodes21_contig00011287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011287
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516957.1| PREDICTED: ran-binding protein 1 homolog c-l...    94   1e-17
emb|CBI15927.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...    94   1e-17
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003556169.1| PREDICTED: ran-binding protein 1 homolog b-l...    92   3e-17

>ref|XP_003516957.1| PREDICTED: ran-binding protein 1 homolog c-like [Glycine max]
          Length = 229

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/70 (70%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
 Frame = +1

Query: 19  MASTDPEH----NXXXXXXXXXXXXGAQVAPIVKLEEVAVTTGEENEDAILDLKAKLYRF 186
           MA+T+PEH    N            GAQVAPIVKLEEVAVTTGEE+ED ILDLKAKLYRF
Sbjct: 1   MATTEPEHRRDENDDDSVTAEDEDTGAQVAPIVKLEEVAVTTGEEDEDPILDLKAKLYRF 60

Query: 187 DKDGNQWKER 216
           DK+GNQWKER
Sbjct: 61  DKEGNQWKER 70


>emb|CBI15927.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
 Frame = +1

Query: 19  MASTDPEH--NXXXXXXXXXXXXGAQVAPIVKLEEVAVTTGEENEDAILDLKAKLYRFDK 192
           MAS+DPE   +            GAQVAPIVKLEEVAVTTGEE+EDA+LDLKAKLYRFDK
Sbjct: 1   MASSDPERREDEDAAAAAEDEDTGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDK 60

Query: 193 DGNQWKER 216
           DGNQWKER
Sbjct: 61  DGNQWKER 68


>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
 Frame = +1

Query: 19  MASTDPEH--NXXXXXXXXXXXXGAQVAPIVKLEEVAVTTGEENEDAILDLKAKLYRFDK 192
           MAS+DPE   +            GAQVAPIVKLEEVAVTTGEE+EDA+LDLKAKLYRFDK
Sbjct: 1   MASSDPERREDEDAAAAAEDEDTGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDK 60

Query: 193 DGNQWKER 216
           DGNQWKER
Sbjct: 61  DGNQWKER 68


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/69 (71%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
 Frame = +1

Query: 19  MASTDPEHNXXXXXXXXXXXX---GAQVAPIVKLEEVAVTTGEENEDAILDLKAKLYRFD 189
           MAST+PEH                GAQVAPIVKLEEVAV+TGEE+EDAILDLK+KLYRFD
Sbjct: 1   MASTEPEHEHREDEEAPAGEDEDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFD 60

Query: 190 KDGNQWKER 216
           KDGNQWKER
Sbjct: 61  KDGNQWKER 69


>ref|XP_003556169.1| PREDICTED: ran-binding protein 1 homolog b-like [Glycine max]
          Length = 223

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/68 (70%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +1

Query: 19  MASTDPEHNXXXXXXXXXXXX--GAQVAPIVKLEEVAVTTGEENEDAILDLKAKLYRFDK 192
           M+S DPEH               GA VAPIVKLEEVAVTTGEE+EDAILDLK+KLYRFDK
Sbjct: 1   MSSADPEHREEEEAPAVGDDEDTGAHVAPIVKLEEVAVTTGEEDEDAILDLKSKLYRFDK 60

Query: 193 DGNQWKER 216
           DGNQWKER
Sbjct: 61  DGNQWKER 68


Top