BLASTX nr result

ID: Atractylodes21_contig00011207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011207
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   424   e-116
ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...   408   e-111
ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110
ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...   396   e-108
ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   387   e-105

>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
            gi|297735744|emb|CBI18431.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  424 bits (1090), Expect = e-116
 Identities = 205/258 (79%), Positives = 227/258 (87%), Gaps = 4/258 (1%)
 Frame = -1

Query: 1059 MKLMSNDSPIEGTSETDPILNESKSVERVDNYSSTFEIRIVGSSVE----DAQSPDVNEN 892
            M+L+SND   E  SET+PIL +S   +R++  S++ EIR V         D ++ D +EN
Sbjct: 1    MQLVSNDRQTEDGSETEPILCQSNIEQRLEESSTSCEIRTVEVDCSIVDGDLENLDTDEN 60

Query: 891  TSLVTLDQPQCRICLDTEGEDLIAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECRA 712
             +LV  DQPQCRICLD  GEDLIAPCHCRGTQKYVHRSCLDNWRST+EGFAF+HCTECRA
Sbjct: 61   CALVNADQPQCRICLDIGGEDLIAPCHCRGTQKYVHRSCLDNWRSTKEGFAFAHCTECRA 120

Query: 711  VFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGLLVYKFYGDELREMFGYE 532
            VFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLG+LVYKFYG+ELREMFGY+
Sbjct: 121  VFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGVLVYKFYGEELREMFGYD 180

Query: 531  EHPYGFYTMAILAIVLVGLLYGFFIAIICGQRINERHYHILAKKELTKEYIVEDREVNKD 352
            EHPYGFYTMA+LAIVLVGLLYGFFIAIICGQRINERHYH+LAK+ELTKEY+VEDREVNKD
Sbjct: 181  EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREVNKD 240

Query: 351  VAELDPSHVTELRMLGLY 298
            V ELDPSHVTELRMLGLY
Sbjct: 241  VPELDPSHVTELRMLGLY 258


>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223547231|gb|EEF48726.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 256

 Score =  408 bits (1048), Expect = e-111
 Identities = 195/256 (76%), Positives = 220/256 (85%), Gaps = 2/256 (0%)
 Frame = -1

Query: 1059 MKLMSNDSPIEGTSETDPILNESKSVERVDNYSSTFEIRIVGSSVE--DAQSPDVNENTS 886
            M+L+SNDS  E  SE +PIL +S  V+R +  SS+ EI  +G   +  D +S  V+E   
Sbjct: 1    MQLVSNDSQKEDISEREPILRQSNIVQRSEESSSSCEITSIGQDCDGDDLESVHVDETCH 60

Query: 885  LVTLDQPQCRICLDTEGEDLIAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECRAVF 706
            LV  DQPQCRICLD  GEDLIAPCHC+GTQKYVHRSCLDNWRST+EGFAF+HCTECRA F
Sbjct: 61   LVNPDQPQCRICLDNGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRASF 120

Query: 705  ILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGLLVYKFYGDELREMFGYEEH 526
            ILRANVPPDRWWLRLKFQ LVARDH FIFV+VQLIVAFLG+ VYKFYG+ELREMFGYEEH
Sbjct: 121  ILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVYKFYGEELREMFGYEEH 180

Query: 525  PYGFYTMAILAIVLVGLLYGFFIAIICGQRINERHYHILAKKELTKEYIVEDREVNKDVA 346
            PYGFYT+A+LAIVLVGLLYGFFIAIICGQRINERHYH+LAK+ELTKEY+VEDRE +K+V 
Sbjct: 181  PYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREASKNVP 240

Query: 345  ELDPSHVTELRMLGLY 298
            ELD +HVTELRMLGLY
Sbjct: 241  ELDATHVTELRMLGLY 256


>ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1|
            predicted protein [Populus trichocarpa]
          Length = 259

 Score =  403 bits (1035), Expect = e-110
 Identities = 194/259 (74%), Positives = 223/259 (86%), Gaps = 5/259 (1%)
 Frame = -1

Query: 1059 MKLMSNDSPIEGTSETDPILNESKSVERVDNYS-STFEIRIVGSS----VEDAQSPDVNE 895
            M+L+SNDS  E  SE++PIL+ S   +  +  S S+ EI+ +G      V+D++S  ++E
Sbjct: 1    MQLVSNDSRKEDISESEPILSHSNISQHSEEESPSSLEIKSLGRDCEIHVDDSESIQIDE 60

Query: 894  NTSLVTLDQPQCRICLDTEGEDLIAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECR 715
               LV  D PQCRICLD EGEDLIAPCHC+GTQKYVHRSCLDNWRST+EGFAF+HCTECR
Sbjct: 61   TCHLVNPDHPQCRICLDNEGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 120

Query: 714  AVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGLLVYKFYGDELREMFGY 535
            A+F+LRANVP DRWWLRLKFQ LVARDHAFIFV+VQLIVAFLG+LVYKFYG+ELREMFGY
Sbjct: 121  AMFVLRANVPADRWWLRLKFQFLVARDHAFIFVVVQLIVAFLGVLVYKFYGEELREMFGY 180

Query: 534  EEHPYGFYTMAILAIVLVGLLYGFFIAIICGQRINERHYHILAKKELTKEYIVEDREVNK 355
            EEHPYGFYTMA+LAIVLVGLLYGFFIAIICGQRINERHYH+LAK+ELTKEY+VEDRE +K
Sbjct: 181  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREASK 240

Query: 354  DVAELDPSHVTELRMLGLY 298
            DV EL  SHV+ELRMLGLY
Sbjct: 241  DVPELGASHVSELRMLGLY 259


>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
            gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score =  396 bits (1018), Expect = e-108
 Identities = 197/259 (76%), Positives = 216/259 (83%), Gaps = 5/259 (1%)
 Frame = -1

Query: 1059 MKLMSNDSPIEGTSETDPILNESKSVERVDNYSSTFEIRIV-----GSSVEDAQSPDVNE 895
            M+L SN    E  SE++PILN    +       S+F   I+      S  +D Q+  V+E
Sbjct: 1    MQLASNGDK-EECSESEPILNHHH-LHLPPPGESSFSCEIIPISAAASGDDDLQNVRVDE 58

Query: 894  NTSLVTLDQPQCRICLDTEGEDLIAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECR 715
               LV  DQPQCRICLD  GEDLIAPCHC+GTQKYVHRSCLDNWRST+EGFAFSHCTECR
Sbjct: 59   TCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECR 118

Query: 714  AVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGLLVYKFYGDELREMFGY 535
            AVFILRANVPPDRWWLRLKFQ LVARDHAFIF+IVQL+VAFLG+LVYKFYGDELREMFGY
Sbjct: 119  AVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGY 178

Query: 534  EEHPYGFYTMAILAIVLVGLLYGFFIAIICGQRINERHYHILAKKELTKEYIVEDREVNK 355
            EEHPYGFYTMA+LAIVLVGLLYGFFIAIICGQRINERHYH+LAK+ELTKEY+VEDRE  K
Sbjct: 179  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVK 238

Query: 354  DVAELDPSHVTELRMLGLY 298
            +V ELDPSHVTELRMLGLY
Sbjct: 239  NVPELDPSHVTELRMLGLY 257


>ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
            gi|449519260|ref|XP_004166653.1| PREDICTED: E3
            ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
          Length = 261

 Score =  387 bits (994), Expect = e-105
 Identities = 191/262 (72%), Positives = 218/262 (83%), Gaps = 8/262 (3%)
 Frame = -1

Query: 1059 MKLMSN-DSPIEGTSETDPILNESKSVERVDNYSSTFEI-------RIVGSSVEDAQSPD 904
            M+L+ N D   +   E  PIL++   + +    SS+ EI       R    S +D  +P+
Sbjct: 1    MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPN 60

Query: 903  VNENTSLVTLDQPQCRICLDTEGEDLIAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCT 724
            ++E   LV  DQPQCRICLDT GEDLIAPCHC+GTQKYVHRSCLDNWRST+EGFAF+HCT
Sbjct: 61   IDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 119

Query: 723  ECRAVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGLLVYKFYGDELREM 544
            ECRA+F+LRANVPPDRWWLRLKFQ LVARDHAFIF+IVQLIVAFLG+LVYKFYG+ELREM
Sbjct: 120  ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 179

Query: 543  FGYEEHPYGFYTMAILAIVLVGLLYGFFIAIICGQRINERHYHILAKKELTKEYIVEDRE 364
            FGYEEHPYGFY MA+LAI+LVGLLYGFFIAIICGQRINERHYH+LAK+ELTKEYIVEDRE
Sbjct: 180  FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 239

Query: 363  VNKDVAELDPSHVTELRMLGLY 298
             NK+V ELDPSHV ELR+LGLY
Sbjct: 240  HNKNVPELDPSHVMELRLLGLY 261


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