BLASTX nr result

ID: Atractylodes21_contig00011190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011190
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...   130   5e-28
ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2...   114   5e-23
ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm...   100   8e-19
ref|XP_002305062.1| predicted protein [Populus trichocarpa] gi|2...    90   8e-16
ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana] g...    84   4e-14

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  130 bits (327), Expect = 5e-28
 Identities = 107/289 (37%), Positives = 147/289 (50%), Gaps = 46/289 (15%)
 Frame = +1

Query: 88  MESVIAYPHSVPGLHHSCAFGKPKLGRLSFSVKXXXXXXXXXXXXXXXXXXXXXXXXXXX 267
           M +V+   HS   L    AF KPKLG+ + S++                           
Sbjct: 1   MVAVVFCSHSALRLQSFYAFSKPKLGKYAVSLQ--------------------------- 33

Query: 268 EIADG--AFLSR---LQLPTSNIRADGNTRAQ---RNSDSGRSINGDDNK---------- 393
           E ADG   F SR   L L  S+I++DGN R +   +N  SGR+  GD NK          
Sbjct: 34  ETADGFSPFASRRDLLPLTISSIKSDGNRRGRPPRKNHISGRTEKGDKNKTPPSSDGKLS 93

Query: 394 ----KDEILALFRRIQSSISAGETTASKGRTNNPS-----AESVLQVLRQSQ-------S 525
               +DEI+ALFRRIQSSIS GE+  +K R ++ S     AESVL++LRQS+       S
Sbjct: 94  ESSNQDEIIALFRRIQSSISKGESLGTKKRISDSSVDKTSAESVLEILRQSRKQVKGRPS 153

Query: 526 RKPAXXXXXXXXXXXXXXXXXXIDFASAEAKISRPPSNFVKRSPIPSE--------RVQD 681
           +K                         A+ K +RPPSNFVKRSPIPS         ++++
Sbjct: 154 KKEGGQVLTQRRGVPKKDQGIPDKQYVADLKSARPPSNFVKRSPIPSPTNPRGKAVKLKN 213

Query: 682 EVK----SVIDGEELETMKLVALKDLARSRGIKGYSKLRKAELIELLKT 816
           EV     S  +  ++E MK+  LK+LA+SRGIKGYSK++K+EL+ELL++
Sbjct: 214 EVSVRTTSFNELPKVEEMKVTELKELAKSRGIKGYSKMKKSELVELLRS 262


>ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  114 bits (284), Expect = 5e-23
 Identities = 87/230 (37%), Positives = 119/230 (51%), Gaps = 47/230 (20%)
 Frame = +1

Query: 268 EIADG--AFLSR---LQLPTSNIRADGNTRAQ---RNSDSGRSINGDDNKKD-------- 399
           EIADG  AF S    LQ   S+I++DG+++ +   ++S  GR+   D++ K         
Sbjct: 35  EIADGSLAFASHNGVLQFSVSSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSSDRKQP 94

Query: 400 ------EILALFRRIQSSISAGETTASK----GRTN-NPSAESVLQVLRQSQSRKPAXXX 546
                 EI+ALFRRIQSSIS GE+TA+K     R+N N    S+L+VLR S         
Sbjct: 95  MSSNQAEIMALFRRIQSSISKGESTATKKKKASRSNENSPTNSILEVLRHSTKHAKGPST 154

Query: 547 XXXXXXXXXXXXXXXID------FASAEAKISRPPSNFVKRSPIPSERVQDEVKSVIDGE 708
                           D       A  + K++RPPSNF K+SPIPS     E  + ++ E
Sbjct: 155 VREGNKVLTQKRSVSKDQKTQAEHALEDVKLTRPPSNFTKKSPIPSPSTSRENTTELNSE 214

Query: 709 --------------ELETMKLVALKDLARSRGIKGYSKLRKAELIELLKT 816
                          +E MKL  LK+LA+SRGIKGYSKL+K EL+ELL++
Sbjct: 215 ASEGKASNHKLELPRVEKMKLTELKELAKSRGIKGYSKLKKGELLELLRS 264


>ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis]
           gi|223538488|gb|EEF40093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score =  100 bits (248), Expect = 8e-19
 Identities = 84/231 (36%), Positives = 113/231 (48%), Gaps = 48/231 (20%)
 Frame = +1

Query: 268 EIADG----AFLSR-LQLPTSNIRADGNTRAQ-----------RNSDSGRSINGDDNK-- 393
           EIADG    ++  R LQL  SN ++DG+ R +           +  D        D K  
Sbjct: 61  EIADGPSTFSWQKRVLQLSISNTKSDGSRRGRSPRKSSSPGKRKKEDKSEKYQFSDGKLP 120

Query: 394 ----KDEILALFRRIQSSISAGETTASKGRTNNPS-----AESVLQVLRQSQSRKPAXXX 546
               KDEI+ALFRRI SSIS GE  +++    N S      ES+L+ LRQS  RKP    
Sbjct: 121 RSPEKDEIIALFRRIHSSISKGEAKSTQQTDINFSEDKSPTESILEALRQS--RKPVKGR 178

Query: 547 XXXXXXXXXXXXXXX-------IDFASAEAKISRPPSNFVKRSPI---------PSERVQ 678
                                     +A+   +RPPS F++RSPI         P+E   
Sbjct: 179 EQDRVSMQKRGVPKEGPKLQNNAQHMAAKFNFTRPPSKFIRRSPISSPSFPRGSPTELNN 238

Query: 679 D-----EVKSVIDGEELETMKLVALKDLARSRGIKGYSKLRKAELIELLKT 816
           D     E   V++  ++E MKL  LK+LA+SRGIKGYSKL+K EL+ELL++
Sbjct: 239 DPSASTESDKVLELPQIEEMKLPELKELAKSRGIKGYSKLKKGELLELLRS 289


>ref|XP_002305062.1| predicted protein [Populus trichocarpa] gi|222848026|gb|EEE85573.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 90.1 bits (222), Expect = 8e-16
 Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 26/169 (15%)
 Frame = +1

Query: 388 NKKDEILALFRRIQSSISAGETTASK----GRTNNPSAESVLQVLRQSQSRKPAXXXXXX 555
           + ++EI+ALFRRIQ SIS GE+TA++    GR+     +S+L+VL +S  RK A      
Sbjct: 60  SNQEEIMALFRRIQYSISKGESTATEKKNAGRSEKSPTDSILEVLLRS--RKQAKDTNTV 117

Query: 556 XXXXXXXXXXXXIDF--------ASAEAKISRPPSNFVKRSPIPSERVQDEVKSVIDGE- 708
                       +          A A+ K++RP SNF K+  IPS     E  + ++ E 
Sbjct: 118 TEGKNVPTHKRSVPKVQKMQARNALADFKLTRPHSNFTKKFSIPSPSTPGEKNAELNSEA 177

Query: 709 -------------ELETMKLVALKDLARSRGIKGYSKLRKAELIELLKT 816
                         +E MKL  LK+LA+SRGIKGYSKL+K EL+E L++
Sbjct: 178 SEAKASGSISELPRVEEMKLTELKELAKSRGIKGYSKLKKGELLEFLRS 226


>ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana]
           gi|332658683|gb|AEE84083.1| Rho termination factor
           [Arabidopsis thaliana]
          Length = 245

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 22/173 (12%)
 Frame = +1

Query: 367 RSINGDDNKKDEILALFRRIQSSISAGETTASKGRTNN-------PSAESVLQVLRQSQS 525
           R+ N   + ++EI++L +RIQSSIS GE+   +   N+       P  +++L VL +S+ 
Sbjct: 86  RTSNPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAILDVLEKSRK 145

Query: 526 RKPAXXXXXXXXXXXXXXXXXXIDFASAEAKISRPPSNFVKRSPIPSERVQDEVKSVIDG 705
           +                           + ++ RPPS+FVKR+P+ S       K  +  
Sbjct: 146 KTEGDTSVKEKPP-------------KRQVELPRPPSSFVKRTPLSSSASGPRGKLPVSN 192

Query: 706 EE---------------LETMKLVALKDLARSRGIKGYSKLRKAELIELLKTT 819
            +               +ETMKL  LK++A++RGIKGYSKLRK+EL+EL++++
Sbjct: 193 SDKALGKLTKKEEKASLIETMKLAELKEVAKNRGIKGYSKLRKSELLELIRSS 245


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