BLASTX nr result

ID: Atractylodes21_contig00011152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011152
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis ...   369   e-100
ref|XP_002311076.1| predicted protein [Populus trichocarpa] gi|2...   361   2e-97
ref|XP_002316386.1| predicted protein [Populus trichocarpa] gi|1...   359   6e-97
ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [C...   356   6e-96
gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]                 356   6e-96

>ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
           gi|147864853|emb|CAN79376.1| hypothetical protein
           VITISV_009584 [Vitis vinifera]
           gi|296085986|emb|CBI31427.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  369 bits (946), Expect = e-100
 Identities = 183/200 (91%), Positives = 193/200 (96%)
 Frame = +1

Query: 208 MGCSSSLPDRSAGRVGGLNPDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 387
           MGCSSSLPDR++GR+GGLN +NGG  DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRNSGRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 388 SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITNPDS 567
           SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDIT+P+S
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 568 FHKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGIDYAEKNGMFFIETSAKTA 747
           F+KAQYWVKELQKHGSPDIV+ALVGNKADL + REV VQDGIDYAEKNGMFFIETSAKTA
Sbjct: 121 FNKAQYWVKELQKHGSPDIVMALVGNKADLHENREVPVQDGIDYAEKNGMFFIETSAKTA 180

Query: 748 DNINQLFEEIAKRLPRPSPS 807
           DNINQLFEEIAKRLPRPS S
Sbjct: 181 DNINQLFEEIAKRLPRPSSS 200


>ref|XP_002311076.1| predicted protein [Populus trichocarpa] gi|222850896|gb|EEE88443.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  361 bits (926), Expect = 2e-97
 Identities = 181/199 (90%), Positives = 192/199 (96%), Gaps = 1/199 (0%)
 Frame = +1

Query: 208 MGCSSSLPDRSAGRVGGLN-PDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 384
           MGCSSSLPDRS GR+GGLN  ++GG  DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
Sbjct: 1   MGCSSSLPDRSTGRLGGLNNSESGGVVDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60

Query: 385 TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITNPD 564
           TSKVT+GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT+P+
Sbjct: 61  TSKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE 120

Query: 565 SFHKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGIDYAEKNGMFFIETSAKT 744
           +F+KAQYWVKELQKHGSPDIV+ALVGNKADLQ+KREV  QDGIDYAEKNGMFF+ETSAKT
Sbjct: 121 TFNKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFMETSAKT 180

Query: 745 ADNINQLFEEIAKRLPRPS 801
           ADNINQLFEEIAKRLPRPS
Sbjct: 181 ADNINQLFEEIAKRLPRPS 199


>ref|XP_002316386.1| predicted protein [Populus trichocarpa] gi|118488888|gb|ABK96253.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222865426|gb|EEF02557.1| predicted protein [Populus
           trichocarpa]
          Length = 201

 Score =  359 bits (922), Expect = 6e-97
 Identities = 179/199 (89%), Positives = 192/199 (96%), Gaps = 1/199 (0%)
 Frame = +1

Query: 208 MGCSSSLPDRSAGRVGGLN-PDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 384
           MGCSSSLPDRS GR+GGLN  ++GG +DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
Sbjct: 1   MGCSSSLPDRSTGRLGGLNNSESGGVADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60

Query: 385 TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITNPD 564
           TSKVT+GASFLSQTIALQDSTT+KFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT+P+
Sbjct: 61  TSKVTIGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE 120

Query: 565 SFHKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGIDYAEKNGMFFIETSAKT 744
           +F+KAQYWVKELQKHGSPDIV+ALVGNKADL +KREV  QDGI+YAEKNGMFFIETSAKT
Sbjct: 121 TFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTQDGIEYAEKNGMFFIETSAKT 180

Query: 745 ADNINQLFEEIAKRLPRPS 801
           ADNINQLFEEIAKRLPRPS
Sbjct: 181 ADNINQLFEEIAKRLPRPS 199


>ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
           gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related
           protein RABF1-like [Cucumis sativus]
          Length = 199

 Score =  356 bits (913), Expect = 6e-96
 Identities = 178/200 (89%), Positives = 192/200 (96%)
 Frame = +1

Query: 208 MGCSSSLPDRSAGRVGGLNPDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 387
           MGCSSS+PDR++GR GGLNP+N   +D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 59

Query: 388 SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITNPDS 567
           SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT+ DS
Sbjct: 60  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 119

Query: 568 FHKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGIDYAEKNGMFFIETSAKTA 747
           F KAQYWVKELQKHGSPDI+LALVGNKADLQ+KR+V+VQDG +YAEKNGMFFIETSAKTA
Sbjct: 120 FAKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTA 179

Query: 748 DNINQLFEEIAKRLPRPSPS 807
           DNIN+LFEEIAKRLPRP+ S
Sbjct: 180 DNINELFEEIAKRLPRPTSS 199


>gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
          Length = 200

 Score =  356 bits (913), Expect = 6e-96
 Identities = 176/198 (88%), Positives = 188/198 (94%)
 Frame = +1

Query: 208 MGCSSSLPDRSAGRVGGLNPDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 387
           MGC+SS+ DR++GR  GLNPDNGG  D KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCASSVADRNSGRAAGLNPDNGGAVDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 388 SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITNPDS 567
           SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDIT+P+S
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 568 FHKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGIDYAEKNGMFFIETSAKTA 747
           F KAQYWVKELQKHGSPDIV+ALVGNKADL +KREV+ QDGID AEKNGMFFIETSAKTA
Sbjct: 121 FAKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVTTQDGIDCAEKNGMFFIETSAKTA 180

Query: 748 DNINQLFEEIAKRLPRPS 801
           DNINQLFEEIAKRLPRP+
Sbjct: 181 DNINQLFEEIAKRLPRPA 198


Top