BLASTX nr result

ID: Atractylodes21_contig00011126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011126
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB66346.1| H2A homolog [Pinus taeda]                              165   4e-39
ref|XP_002518573.1| histone h2a, putative [Ricinus communis] gi|...   162   4e-38
sp|Q84NJ4.1|H2A3_ORYSJ RecName: Full=Probable histone H2A.3 gi|1...   161   6e-38
gb|AEL98843.1| histone H2A, partial [Silene latifolia] gi|343172...   161   6e-38
dbj|BAJ90024.1| predicted protein [Hordeum vulgare subsp. vulgare]    161   8e-38

>gb|AAB66346.1| H2A homolog [Pinus taeda]
          Length = 139

 Score =  165 bits (418), Expect = 4e-39
 Identities = 85/116 (73%), Positives = 92/116 (79%)
 Frame = +3

Query: 3   RGKSIGSAAVTKKATSRSSKAGLQFPVGRIARFLKTGKYAERIGGGAPXXXXXXXXXXXX 182
           RGK++G A  +KK+TSRSSKAGLQFPVGRIARFLK GKYAER+GGGAP            
Sbjct: 4   RGKAVGGAGGSKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGGGAPVYLAAVLEYLAA 63

Query: 183 XXXXXXGNAARDNKKSRVVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHAHLL 350
                 GNAARDNKK+R+VPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIH  LL
Sbjct: 64  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNILL 119


>ref|XP_002518573.1| histone h2a, putative [Ricinus communis]
           gi|223542418|gb|EEF43960.1| histone h2a, putative
           [Ricinus communis]
          Length = 132

 Score =  162 bits (410), Expect = 4e-38
 Identities = 85/116 (73%), Positives = 91/116 (78%)
 Frame = +3

Query: 3   RGKSIGSAAVTKKATSRSSKAGLQFPVGRIARFLKTGKYAERIGGGAPXXXXXXXXXXXX 182
           RGKS+GSAA  KKATSRSSKAGLQFPVGRIARFLK GKYAER+G GAP            
Sbjct: 4   RGKSLGSAAA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 183 XXXXXXGNAARDNKKSRVVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHAHLL 350
                 GNAARDNKK+R+VPRHIQLA+RNDEELSKLLG VTIANGGV+PNIH  LL
Sbjct: 63  EVLELAGNAARDNKKNRIVPRHIQLAIRNDEELSKLLGTVTIANGGVLPNIHGMLL 118


>sp|Q84NJ4.1|H2A3_ORYSJ RecName: Full=Probable histone H2A.3
           gi|158513647|sp|A2YVE5.1|H2A3_ORYSI RecName:
           Full=Probable histone H2A.3 gi|29837243|dbj|BAC75621.1|
           putative histone H2A [Oryza sativa Japonica Group]
           gi|38175493|dbj|BAD01189.1| putative histone H2A [Oryza
           sativa Japonica Group] gi|125561608|gb|EAZ07056.1|
           hypothetical protein OsI_29303 [Oryza sativa Indica
           Group] gi|125603477|gb|EAZ42802.1| hypothetical protein
           OsJ_27388 [Oryza sativa Japonica Group]
          Length = 134

 Score =  161 bits (408), Expect = 6e-38
 Identities = 86/116 (74%), Positives = 92/116 (79%)
 Frame = +3

Query: 3   RGKSIGSAAVTKKATSRSSKAGLQFPVGRIARFLKTGKYAERIGGGAPXXXXXXXXXXXX 182
           RGK+IGS+A  KKATSRSSKAGLQFPVGRIARFLK GKYAER+G GAP            
Sbjct: 4   RGKAIGSSAA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 183 XXXXXXGNAARDNKKSRVVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHAHLL 350
                 GNAARDNKK+R+VPRHIQLAVRNDEELS+LLGAVTIANGGVMPNIH  LL
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLL 118


>gb|AEL98843.1| histone H2A, partial [Silene latifolia] gi|343172280|gb|AEL98844.1|
           histone H2A, partial [Silene latifolia]
          Length = 132

 Score =  161 bits (408), Expect = 6e-38
 Identities = 86/116 (74%), Positives = 92/116 (79%)
 Frame = +3

Query: 3   RGKSIGSAAVTKKATSRSSKAGLQFPVGRIARFLKTGKYAERIGGGAPXXXXXXXXXXXX 182
           RGK++GS+A TKKATSRSSKAGLQFPVGRIARFLK GKYAER+G GAP            
Sbjct: 4   RGKTLGSSA-TKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 183 XXXXXXGNAARDNKKSRVVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHAHLL 350
                 GNAARDNKK+R+VPRHIQLAVRNDEELSKLLG VTIANGGVMPNIH  LL
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLL 118


>dbj|BAJ90024.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 135

 Score =  161 bits (407), Expect = 8e-38
 Identities = 84/116 (72%), Positives = 91/116 (78%)
 Frame = +3

Query: 3   RGKSIGSAAVTKKATSRSSKAGLQFPVGRIARFLKTGKYAERIGGGAPXXXXXXXXXXXX 182
           RGK+IG+ AV KKATSRSSKAGLQFPVGRIARFLK GKYAER+G GAP            
Sbjct: 4   RGKAIGAGAV-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 183 XXXXXXGNAARDNKKSRVVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHAHLL 350
                 GNAARDNKK+R+VPRHIQLAVRNDEEL+KLLG  TIA+GGVMPNIH HLL
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLL 118


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