BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00011112
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...    75   9e-12
emb|CBI24290.3| unnamed protein product [Vitis vinifera]               75   9e-12
dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati...    67   4e-09
ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group] g...    67   4e-09

>ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|222845418|gb|EEE82965.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 61/140 (43%), Positives = 66/140 (47%)
 Frame = +3

Query: 123 MQPDIRKWFMKQHDKGNDNGNTPKPAKPTLTIPGKLSTAKDAALXXXXXXXXXXXXXXXX 302
           MQ DIRKWFMK HDKGNDN  T    KP  T P K  T                      
Sbjct: 1   MQRDIRKWFMKAHDKGNDNAATNAEKKPPPTEP-KTETP--------------------- 38

Query: 303 XXXXXXXXXXXXXSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDATEVSGLSAKRKLQK 482
                              V GGQE SGRRKTSKYFA +KQ Q++  E+  L AKRK Q 
Sbjct: 39  -------------------VCGGQEGSGRRKTSKYFAANKQKQKEDKEIEDLPAKRKAQN 79

Query: 483 SCGQSSADVKPPPGKKLHTV 542
              QS   VKPPP KK+H V
Sbjct: 80  DGVQS---VKPPPSKKVHKV 96


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 60/159 (37%), Positives = 70/159 (44%)
 Frame = +3

Query: 132 DIRKWFMKQHDKGNDNGNTPKPAKPTLTIPGKLSTAKDAALXXXXXXXXXXXXXXXXXXX 311
           DIRKWFMK+HD  NDNGN  KPAKP    P    + K +                     
Sbjct: 7   DIRKWFMKKHD--NDNGNPLKPAKPE---PKASQSGKPSPATVQQE-------------- 47

Query: 312 XXXXXXXXXXSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDATEVSGLSAKRKLQKSCG 491
                         K V GGQESS RRKTSKYF    Q  +D  E+  L AKRK QK   
Sbjct: 48  --------------KPVHGGQESSCRRKTSKYF----QKPKDEKEMEELPAKRKTQKGTK 89

Query: 492 QSSADVKPPPGKKLHTVXXXXXXXXXXFVLSKTGKSSVE 608
           +S   + PPP KK+  V          FVL K+    V+
Sbjct: 90  ES---LNPPPSKKIRRV---VDDDDDDFVLHKSDDEKVD 122


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 60/159 (37%), Positives = 70/159 (44%)
 Frame = +3

Query: 132 DIRKWFMKQHDKGNDNGNTPKPAKPTLTIPGKLSTAKDAALXXXXXXXXXXXXXXXXXXX 311
           DIRKWFMK+HD  NDNGN  KPAKP    P    + K +                     
Sbjct: 7   DIRKWFMKKHD--NDNGNPLKPAKPE---PKASQSGKPSPATVQQE-------------- 47

Query: 312 XXXXXXXXXXSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDATEVSGLSAKRKLQKSCG 491
                         K V GGQESS RRKTSKYF    Q  +D  E+  L AKRK QK   
Sbjct: 48  --------------KPVHGGQESSCRRKTSKYF----QKPKDEKEMEELPAKRKTQKGTK 89

Query: 492 QSSADVKPPPGKKLHTVXXXXXXXXXXFVLSKTGKSSVE 608
           +S   + PPP KK+  V          FVL K+    V+
Sbjct: 90  ES---LNPPPSKKIRRV---VDDDDDDFVLHKSDDEKVD 122


>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
          Length = 1021

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 51/148 (34%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
 Frame = +3

Query: 123 MQPDIRKWFMKQHDKGNDNGNTPKPA-------KPTLTIPGKLSTAKDAALXXXXXXXXX 281
           M  DIRKWFMK  DK   NG   KPA       KP L+IP K S A   A          
Sbjct: 1   MSSDIRKWFMKAQDK---NGGAAKPAGTTALAKKPVLSIPEKPSAAPSMAACD------- 50

Query: 282 XXXXXXXXXXXXXXXXXXXXSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDATEVSGLS 461
                                         Q+ S RRKTSKYFA+  + +ED +   G  
Sbjct: 51  ------------------------------QDCSARRKTSKYFASKTEKEEDTSAGKGTG 80

Query: 462 ---AKRKLQKSCGQSSADVKPPPGKKLH 536
               KRKLQK   +   D+KP P K++H
Sbjct: 81  RGLPKRKLQKVSDELEDDMKPLPAKEVH 108


>ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
           gi|108864532|gb|ABA94349.2| BRCA1 C Terminus domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza
           sativa Japonica Group] gi|215697840|dbj|BAG92033.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 1021

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 51/148 (34%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
 Frame = +3

Query: 123 MQPDIRKWFMKQHDKGNDNGNTPKPA-------KPTLTIPGKLSTAKDAALXXXXXXXXX 281
           M  DIRKWFMK  DK   NG   KPA       KP L+IP K S A   A          
Sbjct: 1   MSSDIRKWFMKAQDK---NGGAAKPAGTTALAKKPVLSIPEKPSAAPSMAACD------- 50

Query: 282 XXXXXXXXXXXXXXXXXXXXSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDATEVSGLS 461
                                         Q+ S RRKTSKYFA+  + +ED +   G  
Sbjct: 51  ------------------------------QDCSARRKTSKYFASKTEKEEDTSAGKGTG 80

Query: 462 ---AKRKLQKSCGQSSADVKPPPGKKLH 536
               KRKLQK   +   D+KP P K++H
Sbjct: 81  RGLPKRKLQKVSDELEDDMKPLPAKEVH 108