BLASTX nr result

ID: Atractylodes21_contig00010978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010978
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...   286   4e-75
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   286   4e-75
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   286   5e-75
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   285   1e-74
dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]     285   1e-74

>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score =  286 bits (732), Expect = 4e-75
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = +1

Query: 73  MGRMHSKGKGISASAKPYKRSPPSWLKISAQDVQDSICKLAKKGMTPSQIGVILRDSHGI 252
           MGRMHS+GKGISASA PYKR+PPSWLKISA DV+D+ICK AKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 253 AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 432
           AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 433 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 525
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  286 bits (732), Expect = 4e-75
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = +1

Query: 73  MGRMHSKGKGISASAKPYKRSPPSWLKISAQDVQDSICKLAKKGMTPSQIGVILRDSHGI 252
           MGRMHS+GKGISASA PYKR+PPSWLKISA DV+D+ICK AKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 253 AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 432
           AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 433 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 525
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  286 bits (731), Expect = 5e-75
 Identities = 140/151 (92%), Positives = 149/151 (98%)
 Frame = +1

Query: 73  MGRMHSKGKGISASAKPYKRSPPSWLKISAQDVQDSICKLAKKGMTPSQIGVILRDSHGI 252
           MGRMHS+GKGIS+SA PYKR+PPSWLKIS+QDV+++ICK AKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 253 AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 432
           AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 433 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 525
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  285 bits (728), Expect = 1e-74
 Identities = 140/151 (92%), Positives = 148/151 (98%)
 Frame = +1

Query: 73  MGRMHSKGKGISASAKPYKRSPPSWLKISAQDVQDSICKLAKKGMTPSQIGVILRDSHGI 252
           MGRMHS+GKGIS+SA PYKR+PPSWLKIS+QDV+++ICK AKKGMTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 253 AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 432
           AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 433 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 525
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
          Length = 151

 Score =  285 bits (728), Expect = 1e-74
 Identities = 141/151 (93%), Positives = 146/151 (96%)
 Frame = +1

Query: 73  MGRMHSKGKGISASAKPYKRSPPSWLKISAQDVQDSICKLAKKGMTPSQIGVILRDSHGI 252
           MGRMHS+GKGISASA PYKR+PPSWLKI+ QDV D+ICK AKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 253 AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 432
           AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 433 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 525
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


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