BLASTX nr result

ID: Atractylodes21_contig00010963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010963
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   293   3e-77
ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   288   7e-76
ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   287   2e-75
ref|XP_004170150.1| PREDICTED: DDB1- and CUL4-associated factor ...   284   1e-74
ref|XP_004144522.1| PREDICTED: DDB1- and CUL4-associated factor ...   284   1e-74

>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
           gi|302143337|emb|CBI21898.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  293 bits (749), Expect = 3e-77
 Identities = 140/163 (85%), Positives = 153/163 (93%)
 Frame = +1

Query: 1   VSAVMDIDYSPTGREFVTGSYDRTVRIFHYNGGHSREIYHTKRMQRVFCVKFSSDASYVI 180
           VSAVMDIDYSPTGREFVTGSYDRTVRIF YNGGHSREIYHTKRMQRVFCVKF+ DASYVI
Sbjct: 289 VSAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFTCDASYVI 348

Query: 181 SGSDDTNLRLWKAKASEQLGVILPRERKKHEYMEAVKNRYKHLPEVKRILRHRHLPKPIY 360
           SGSDDTNLRLWKAKASEQLGV+LPRERKKHEY EAVKNRYKHLPEVKRI+RHRHLPKPI+
Sbjct: 349 SGSDDTNLRLWKAKASEQLGVLLPRERKKHEYHEAVKNRYKHLPEVKRIVRHRHLPKPIF 408

Query: 361 KAGLLRRTMADAEKRKEDRRRAHSAPGSMPRKSVRKNRIIQEI 489
           KA  LRRTM +AE+RKE++R+AHSAPGS+  + +RK RIIQE+
Sbjct: 409 KAAALRRTMTEAERRKEEKRKAHSAPGSISTEPLRKRRIIQEV 451


>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  288 bits (737), Expect = 7e-76
 Identities = 137/163 (84%), Positives = 153/163 (93%)
 Frame = +1

Query: 1   VSAVMDIDYSPTGREFVTGSYDRTVRIFHYNGGHSREIYHTKRMQRVFCVKFSSDASYVI 180
           VSAVMDID+SPTGREFVTGSYDRTVRIF YNGGHSREIYHTKRMQRVFCVKFS DASYVI
Sbjct: 289 VSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVI 348

Query: 181 SGSDDTNLRLWKAKASEQLGVILPRERKKHEYMEAVKNRYKHLPEVKRILRHRHLPKPIY 360
           SGSDDTNLRLWKAKASEQLGV+LPRE+K+HEY EA+KNRYKHLPEVKRI+RHRHLPKPIY
Sbjct: 349 SGSDDTNLRLWKAKASEQLGVLLPREQKRHEYNEALKNRYKHLPEVKRIVRHRHLPKPIY 408

Query: 361 KAGLLRRTMADAEKRKEDRRRAHSAPGSMPRKSVRKNRIIQEI 489
           KAG+LRR M +AE+RK+ RR+AHSAPGS+  + +RK RII+E+
Sbjct: 409 KAGVLRRVMIEAERRKDQRRKAHSAPGSIVTEPMRKRRIIKEV 451


>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
           nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis]
          Length = 452

 Score =  287 bits (734), Expect = 2e-75
 Identities = 137/162 (84%), Positives = 150/162 (92%)
 Frame = +1

Query: 1   VSAVMDIDYSPTGREFVTGSYDRTVRIFHYNGGHSREIYHTKRMQRVFCVKFSSDASYVI 180
           VSAVMDID+SPTGREFVTGSYDRTVRIF YNGGHSREIYHTKRMQRVFCVKFS D SY+I
Sbjct: 289 VSAVMDIDFSPTGREFVTGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKFSCDGSYII 348

Query: 181 SGSDDTNLRLWKAKASEQLGVILPRERKKHEYMEAVKNRYKHLPEVKRILRHRHLPKPIY 360
           SGSDDTNLRLWKAKASEQLGV+LPRERK+HEY EAVKNRYKHLPE+KRI+RHRHLPKPIY
Sbjct: 349 SGSDDTNLRLWKAKASEQLGVLLPRERKRHEYNEAVKNRYKHLPEIKRIVRHRHLPKPIY 408

Query: 361 KAGLLRRTMADAEKRKEDRRRAHSAPGSMPRKSVRKNRIIQE 486
           KA  +RRT+ +AEKRKEDRRRAHS PGS+  + +RK RII+E
Sbjct: 409 KAAEIRRTVTEAEKRKEDRRRAHSTPGSVVTEPLRKRRIIKE 450


>ref|XP_004170150.1| PREDICTED: DDB1- and CUL4-associated factor 13-like, partial
           [Cucumis sativus]
          Length = 238

 Score =  284 bits (726), Expect = 1e-74
 Identities = 134/163 (82%), Positives = 152/163 (93%)
 Frame = +1

Query: 1   VSAVMDIDYSPTGREFVTGSYDRTVRIFHYNGGHSREIYHTKRMQRVFCVKFSSDASYVI 180
           VSAVMDID+SP+GREFVTGSYDRT+RIF YNGGHSREIYHTKRMQRVFCV+FS DASYVI
Sbjct: 75  VSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVI 134

Query: 181 SGSDDTNLRLWKAKASEQLGVILPRERKKHEYMEAVKNRYKHLPEVKRILRHRHLPKPIY 360
           SGSDDTNLRLWKAKASEQLGV+LPRE++KHEY EAVKNRYKHLPEVKRI+RHRHLPKPI+
Sbjct: 135 SGSDDTNLRLWKAKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIF 194

Query: 361 KAGLLRRTMADAEKRKEDRRRAHSAPGSMPRKSVRKNRIIQEI 489
           KA  LRRT+ DAE+RKE+RR+AHSAPGS+    +R+ RII+E+
Sbjct: 195 KAAALRRTIIDAERRKEERRKAHSAPGSISTVPLRRRRIIKEV 237


>ref|XP_004144522.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Cucumis
           sativus]
          Length = 451

 Score =  284 bits (726), Expect = 1e-74
 Identities = 134/163 (82%), Positives = 152/163 (93%)
 Frame = +1

Query: 1   VSAVMDIDYSPTGREFVTGSYDRTVRIFHYNGGHSREIYHTKRMQRVFCVKFSSDASYVI 180
           VSAVMDID+SP+GREFVTGSYDRT+RIF YNGGHSREIYHTKRMQRVFCV+FS DASYVI
Sbjct: 288 VSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVI 347

Query: 181 SGSDDTNLRLWKAKASEQLGVILPRERKKHEYMEAVKNRYKHLPEVKRILRHRHLPKPIY 360
           SGSDDTNLRLWKAKASEQLGV+LPRE++KHEY EAVKNRYKHLPEVKRI+RHRHLPKPI+
Sbjct: 348 SGSDDTNLRLWKAKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIF 407

Query: 361 KAGLLRRTMADAEKRKEDRRRAHSAPGSMPRKSVRKNRIIQEI 489
           KA  LRRT+ DAE+RKE+RR+AHSAPGS+    +R+ RII+E+
Sbjct: 408 KAAALRRTIIDAERRKEERRKAHSAPGSISTVPLRRRRIIKEV 450


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