BLASTX nr result

ID: Atractylodes21_contig00010962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010962
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264370.2| PREDICTED: uncharacterized protein LOC100252...   100   2e-19
emb|CBI23195.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002316559.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|NP_567263.1| Chaperonin-like RbcX protein [Arabidopsis thali...    89   3e-16
ref|NP_001242292.1| uncharacterized protein LOC100803175 [Glycin...    86   2e-15

>ref|XP_002264370.2| PREDICTED: uncharacterized protein LOC100252097 [Vitis vinifera]
          Length = 172

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   FFNMESSTILPLSHLSFLNHKPHGPTIAAFPFKQWKQT-SHRTHLNCQKMYVPGFGEASP 179
           +  ME+S I P + LSF +++P      A+P + WKQ  S  T ++CQKMYV GFGEASP
Sbjct: 2   YLPMEASAISPSAQLSFFSYRPD--RTRAYPSRPWKQRISQPTRIHCQKMYVAGFGEASP 59

Query: 180 EAKAAKNLHNFFTYVAVRIVNAQLE 254
           EAKAAKN+HNFFTY+AVRIV AQL+
Sbjct: 60  EAKAAKNIHNFFTYIAVRIVTAQLQ 84


>emb|CBI23195.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   FFNMESSTILPLSHLSFLNHKPHGPTIAAFPFKQWKQT-SHRTHLNCQKMYVPGFGEASP 179
           +  ME+S I P + LSF +++P      A+P + WKQ  S  T ++CQKMYV GFGEASP
Sbjct: 16  YLPMEASAISPSAQLSFFSYRPD--RTRAYPSRPWKQRISQPTRIHCQKMYVAGFGEASP 73

Query: 180 EAKAAKNLHNFFTYVAVRIVNAQLE 254
           EAKAAKN+HNFFTY+AVRIV AQL+
Sbjct: 74  EAKAAKNIHNFFTYIAVRIVTAQLQ 98


>ref|XP_002316559.1| predicted protein [Populus trichocarpa] gi|222859624|gb|EEE97171.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
 Frame = +3

Query: 12  MESSTILPLSHLSFLNHKPHGPTIAAFPFKQWKQ--TSHRTHLNCQKMYVPGFGEASPEA 185
           ME+S++L LS LSF   KP+     A+P    K+  T+  T L CQKMYVPGFGEASPE 
Sbjct: 1   METSSVLSLSQLSFFLPKPYRNK--AYPSWSCKKPRTTQPTRLYCQKMYVPGFGEASPEK 58

Query: 186 KAAKNLHNFFTYVAVRIVNAQLE 254
           KAAKNLH+FFTY+AVRIV AQLE
Sbjct: 59  KAAKNLHDFFTYIAVRIVTAQLE 81


>ref|NP_567263.1| Chaperonin-like RbcX protein [Arabidopsis thaliana]
           gi|15027851|gb|AAK76456.1| unknown protein [Arabidopsis
           thaliana] gi|23296672|gb|AAN13142.1| unknown protein
           [Arabidopsis thaliana] gi|332656979|gb|AEE82379.1|
           Chaperonin-like RbcX protein [Arabidopsis thaliana]
          Length = 174

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = +3

Query: 18  SSTILPLSHLSFLNHKPHGPTIAAFPFKQWKQTSHRTHLNCQKMYVPGFGEASPEAKAAK 197
           SS++L  S+LS+LN K     + ++P  Q  +   +T +   KMYVPGFGEASPEAKAAK
Sbjct: 4   SSSLLHHSYLSYLNPKFGKRPLVSYPLMQSSRKCKQTRICSNKMYVPGFGEASPEAKAAK 63

Query: 198 NLHNFFTYVAVRIVNAQLE 254
           +LH+FFTYVAVRIV+AQLE
Sbjct: 64  HLHDFFTYVAVRIVSAQLE 82


>ref|NP_001242292.1| uncharacterized protein LOC100803175 [Glycine max]
           gi|255640618|gb|ACU20594.1| unknown [Glycine max]
          Length = 172

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = +3

Query: 12  MESSTILPLSHLSFLNHKPHGPTIAAFPFKQWKQ--TSHRTHLNCQKMYVPGFGEASPEA 185
           MES   LPLS L ++          A+PF   K+  +S  T L+C KM+VPGFGEASPEA
Sbjct: 1   MESCATLPLSQLPYVYPSTLSSN-KAYPFWPCKRRSSSQPTRLHCSKMFVPGFGEASPEA 59

Query: 186 KAAKNLHNFFTYVAVRIVNAQLE 254
           KAA+NLHNFFT+VAV+IV AQLE
Sbjct: 60  KAAQNLHNFFTFVAVKIVAAQLE 82


Top