BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010936
         (2199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...   246   2e-62
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   216   3e-53
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]   201   9e-49
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]   200   1e-48
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]   198   4e-48

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
            gi|18266821|sp|P15629.2|POL_SOCMV RecName: Full=Enzymatic
            polyprotein; Includes: RecName: Full=Aspartic protease;
            Includes: RecName: Full=Endonuclease; Includes: RecName:
            Full=Reverse transcriptase gi|11322953|emb|CAC16945.1|
            putative reverse transcriptase [Soybean chlorotic mottle
            virus]
          Length = 692

 Score =  246 bits (627), Expect = 2e-62
 Identities = 129/243 (53%), Positives = 161/243 (66%), Gaps = 20/243 (8%)
 Frame = +3

Query: 3    LGCINYIAEQGFLANIADYRRPLQKKLSEKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQ 182
            LGCINYIA +GF  N+A  R+ LQKK+S K PW W T DT++V+ IK K+Q +P LYN  
Sbjct: 444  LGCINYIANEGFFKNLALERKHLQKKISVKNPWKWDTIDTKMVQSIKGKIQSLPKLYNAS 503

Query: 183  SQDFLIVETDASKDTWSGCLRAIKNGKKILGLNEDGSKIPD--------SINPIP----- 323
             QDFLIVETDAS+ +WSGCLRA+  GK+ +GL+E G    D        S +  P     
Sbjct: 504  IQDFLIVETDASQHSWSGCLRALPKGKQKIGLDEFGIPTADLCTGSSSASSDNSPAEIDK 563

Query: 324  -------NTNEITEYKTERFEPDLCRYVSGTLSPTEQNYSVHEKETLACLKTLKKWRIEL 482
                   +T+  ++ K    E  LC+YVSGT + TE  Y + E E LA +K L+KWRI+L
Sbjct: 564  CHSASKQDTHVASKIKKLENELLLCKYVSGTFTDTETRYPIAELEVLAGVKVLEKWRIDL 623

Query: 483  LPTRFELRTDSKYVLGFWRYKLKEDYNKGRLIRWQLQLRQFNPYLKYIKSENNCFADTLT 662
            L TRF LRTDSKY  GF RY +K DY  GRLIRWQL+L+ + PY++ IKSENN FADTLT
Sbjct: 624  LQTRFLLRTDSKYFAGFCRYNIKTDYRNGRLIRWQLRLQAYQPYVELIKSENNPFADTLT 683

Query: 663  REW 671
            REW
Sbjct: 684  REW 686


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
            virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
            Full=Enzymatic polyprotein; Includes: RecName:
            Full=Aspartic protease; Includes: RecName:
            Full=Endonuclease; Includes: RecName: Full=Reverse
            transcriptase gi|32305282|gb|AAP78924.1| putative
            multifunctional pol protein [Cestrum yellow leaf curling
            virus]
          Length = 643

 Score =  216 bits (549), Expect = 3e-53
 Identities = 109/224 (48%), Positives = 142/224 (63%)
 Frame = +3

Query: 3    LGCINYIAEQGFLANIADYRRPLQKKLSEKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQ 182
            LGC+NYIA++GFL  IA   + L  K+S   PW WS  D+++V QIK K + +  LY P+
Sbjct: 443  LGCLNYIADKGFLKEIAKETKNLYPKVSITNPWHWSDLDSKLVNQIKKKCKDLSPLYFPK 502

Query: 183  SQDFLIVETDASKDTWSGCLRAIKNGKKILGLNEDGSKIPDSINPIPNTNEITEYKTERF 362
             +D+LI+ETDAS DTW+GCL+A                  + + P    N++ E      
Sbjct: 503  PEDYLIIETDASGDTWAGCLKAA-----------------ELLFPKGTKNKVVER----- 540

Query: 363  EPDLCRYVSGTLSPTEQNYSVHEKETLACLKTLKKWRIELLPTRFELRTDSKYVLGFWRY 542
               LC+Y SG  S  EQ Y+VHEKETLA LKT++KW+ ELLP  F LRTDS YV GF R+
Sbjct: 541  ---LCKYTSGIFSSAEQKYTVHEKETLAALKTMRKWKAELLPKEFTLRTDSSYVTGFARH 597

Query: 543  KLKEDYNKGRLIRWQLQLRQFNPYLKYIKSENNCFADTLTREWK 674
             LK +YN+GRL+RWQL+  Q+   ++YIK E N  ADTLTREWK
Sbjct: 598  NLKANYNQGRLVRWQLEFLQYPARVEYIKGEKNSLADTLTREWK 641


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score =  201 bits (510), Expect = 9e-49
 Identities = 105/231 (45%), Positives = 141/231 (61%), Gaps = 7/231 (3%)
 Frame = +3

Query: 3    LGCINYIAEQGFLANIADYRRPLQKKLSEKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQ 182
            LG +NYI+E+GF+ N A YR+ LQKK+SEK PW W++ DT  V+ +K   Q +P LYN +
Sbjct: 439  LGNLNYISEKGFIKNFAKYRKELQKKVSEKVPWKWTSYDTTQVQALKALCQRLPKLYNAK 498

Query: 183  SQDFLIVETDASKDTWSGCLRAIKNGKKILGLNEDGSKIPDSINPIPNTNEITEYKTERF 362
              D LI+ TDAS   W   + A+      + +N  G  I D      +T +    + + F
Sbjct: 499  ESDLLIIATDASNGHWGAVMTAVTP----VYINNYGISIEDLFPKEQHTAQALSSQYQFF 554

Query: 363  EPD-------LCRYVSGTLSPTEQNYSVHEKETLACLKTLKKWRIELLPTRFELRTDSKY 521
                      L +Y SGT + TE+ Y +HE ETLA L+T +KW+++LL   F L+TDSKY
Sbjct: 555  GTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKY 614

Query: 522  VLGFWRYKLKEDYNKGRLIRWQLQLRQFNPYLKYIKSENNCFADTLTREWK 674
            V GF RYK+K +YN+GRLIRWQL+L QF+    YIK   N   DTLTREWK
Sbjct: 615  VTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKGSENYGPDTLTREWK 665


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score =  200 bits (509), Expect = 1e-48
 Identities = 104/231 (45%), Positives = 141/231 (61%), Gaps = 7/231 (3%)
 Frame = +3

Query: 3    LGCINYIAEQGFLANIADYRRPLQKKLSEKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQ 182
            LG +NYI+E+GF+ + A YR+ LQKK+SEK PW W++ DT  V+ +K   Q +P LYN +
Sbjct: 452  LGNLNYISEKGFIRDFAKYRKELQKKVSEKVPWKWTSYDTTQVQALKALCQRLPKLYNAK 511

Query: 183  SQDFLIVETDASKDTWSGCLRAIKNGKKILGLNEDGSKIPDSINPIPNTNEITEYKTERF 362
              D LI+ TDAS   W   + A+      + +N  G  + D      +T +    + + F
Sbjct: 512  ESDLLIIATDASNGHWGAVMTAVTP----VHINNYGISLEDLFPKEQHTAQALSSQYQFF 567

Query: 363  EPD-------LCRYVSGTLSPTEQNYSVHEKETLACLKTLKKWRIELLPTRFELRTDSKY 521
                      L +Y SGT + TE+ Y +HE ETLA L+T +KW+++LL   F L+TDSKY
Sbjct: 568  GTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLTKPFILKTDSKY 627

Query: 522  VLGFWRYKLKEDYNKGRLIRWQLQLRQFNPYLKYIKSENNCFADTLTREWK 674
            V GF RYK+K +YN+GRLIRWQL+L QFN    YIK   N   DTLTREWK
Sbjct: 628  VTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKGSENYGPDTLTREWK 678


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  198 bits (504), Expect = 4e-48
 Identities = 103/231 (44%), Positives = 140/231 (60%), Gaps = 7/231 (3%)
 Frame = +3

Query: 3    LGCINYIAEQGFLANIADYRRPLQKKLSEKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQ 182
            LG +NYI+E+GF+ + A YR+ LQKK+SEK PW W++ DT  V+ +K   Q +P LYN +
Sbjct: 429  LGNLNYISEKGFIKDFAKYRKELQKKVSEKVPWKWTSYDTSQVQALKTLCQRLPKLYNAK 488

Query: 183  SQDFLIVETDASKDTWSGCLRAIKNGKKILGLNEDGSKIPDSINPIPNTNEITEYKTERF 362
              D LI+ TDAS   W   + A+      + +   G  + D      +T +    + + F
Sbjct: 489  ESDLLIIATDASNGHWGAVMTAVTP----VHITNYGISLEDLFPKEQHTAQALSSQYQFF 544

Query: 363  EPD-------LCRYVSGTLSPTEQNYSVHEKETLACLKTLKKWRIELLPTRFELRTDSKY 521
                      L +Y SGT + TE+ Y +HE ETLA L+T +KW+++LL   F L+TDSKY
Sbjct: 545  GTKDFVQKELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKY 604

Query: 522  VLGFWRYKLKEDYNKGRLIRWQLQLRQFNPYLKYIKSENNCFADTLTREWK 674
            V GF RYK+K +YN+GRLIRWQL+L QFN    YIK   N   DTLTREWK
Sbjct: 605  VTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKGSENYGPDTLTREWK 655