BLASTX nr result

ID: Atractylodes21_contig00010906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010906
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165149.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   147   1e-33
ref|XP_003547867.1| PREDICTED: 40S ribosomal protein SA-like [Gl...   145   3e-33
ref|XP_004149157.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   144   8e-33
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g...   142   2e-32
gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indi...   142   2e-32

>ref|XP_004165149.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 298

 Score =  147 bits (370), Expect = 1e-33
 Identities = 84/134 (62%), Positives = 87/134 (64%)
 Frame = +2

Query: 131 ATMAQSKVLTTKEADIQMMLSAEVHLGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310
           AT  +   L+ KEADIQMML+AEVHLGTK                               
Sbjct: 2   ATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRND--------------- 46

Query: 311 XXXXXXXXXXGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT 490
                     GIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT
Sbjct: 47  ----------GIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT 96

Query: 491 GAHAIAGRHTPGTF 532
           GAHAIAGRHTPGTF
Sbjct: 97  GAHAIAGRHTPGTF 110


>ref|XP_003547867.1| PREDICTED: 40S ribosomal protein SA-like [Glycine max]
          Length = 311

 Score =  145 bits (367), Expect = 3e-33
 Identities = 83/139 (59%), Positives = 89/139 (64%)
 Frame = +2

Query: 116 AKSEAATMAQSKVLTTKEADIQMMLSAEVHLGTKXXXXXXXXXXXXXXXXXXXXXXXXXX 295
           A +  A  A  + L+ KEADIQMML+A+VHLGTK                          
Sbjct: 2   ATTTNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRND---------- 51

Query: 296 XXXXXXXXXXXXXXXGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLK 475
                          GIYIINLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLK
Sbjct: 52  ---------------GIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLK 96

Query: 476 FAQYTGAHAIAGRHTPGTF 532
           FAQYTGAHAIAGRHTPGTF
Sbjct: 97  FAQYTGAHAIAGRHTPGTF 115


>ref|XP_004149157.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 298

 Score =  144 bits (363), Expect = 8e-33
 Identities = 83/134 (61%), Positives = 87/134 (64%)
 Frame = +2

Query: 131 ATMAQSKVLTTKEADIQMMLSAEVHLGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310
           AT  +   L+ KEADIQMML+AEV+LGTK                               
Sbjct: 2   ATGTEQCQLSQKEADIQMMLAAEVNLGTKNCDFQMERYVFKRRND--------------- 46

Query: 311 XXXXXXXXXXGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT 490
                     GIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT
Sbjct: 47  ----------GIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT 96

Query: 491 GAHAIAGRHTPGTF 532
           GAHAIAGRHTPGTF
Sbjct: 97  GAHAIAGRHTPGTF 110


>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A
           Chain A, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|33146943|dbj|BAC79991.1|
           putative 40S ribosomal protein [Oryza sativa Japonica
           Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza
           sativa Japonica Group] gi|125601085|gb|EAZ40661.1|
           hypothetical protein OsJ_25132 [Oryza sativa Japonica
           Group] gi|215678910|dbj|BAG96340.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215734975|dbj|BAG95697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740977|dbj|BAG97472.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764959|dbj|BAG86656.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  142 bits (359), Expect = 2e-32
 Identities = 79/131 (60%), Positives = 86/131 (65%)
 Frame = +2

Query: 140 AQSKVLTTKEADIQMMLSAEVHLGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           A ++ L+ +E DIQMML+A+VHLGTK                                  
Sbjct: 7   AAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTD------------------ 48

Query: 320 XXXXXXXGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH 499
                  GIYIINLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Sbjct: 49  -------GIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH 101

Query: 500 AIAGRHTPGTF 532
           AIAGRHTPGTF
Sbjct: 102 AIAGRHTPGTF 112


>gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
          Length = 305

 Score =  142 bits (359), Expect = 2e-32
 Identities = 79/131 (60%), Positives = 86/131 (65%)
 Frame = +2

Query: 140 AQSKVLTTKEADIQMMLSAEVHLGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           A ++ L+ +E DIQMML+A+VHLGTK                                  
Sbjct: 7   AAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTD------------------ 48

Query: 320 XXXXXXXGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH 499
                  GIYIINLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Sbjct: 49  -------GIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH 101

Query: 500 AIAGRHTPGTF 532
           AIAGRHTPGTF
Sbjct: 102 AIAGRHTPGTF 112


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